Find hotels near Shelter Island, San Diego from CA $115

Most hotels are fully refundable. Because flexibility matters.

Save an average of 15% on thousands of hotels with Expedia Rewards

Search over 2.9 million properties and 550 airlines worldwide

Filter by

Popular filters
Popular filters
Guest rating
Guest rating
Star rating
Payment type
Payment type
Property type
Property type
Area
Area
Popular locations
Popular locations
Meal plans available
Meal plans available
Amenities
Amenities
Accessibility
Accessibility
Traveller experience
Traveller experience

Top Hotels Close to Shelter Island

Wyndham San Diego Bayside
4.0 star property
8.2 out of 10, Very good, (5908)
"I enjoyed the convenience of being right downtown . Only stayed one night but it was an eventful one night with all the local little towns and eatery’s near by . "
The price is CA $220
CA $248 total
includes taxes & fees
May 23 - May 24
Wyndham San Diego Bayside
Paradise Point Resort & Spa
4.0 star property
8.4 out of 10, Very good, (1823)
"I want to visit this property every month! I can’t say enough about how gorgeous the grounds are and walkable to the water. "
The price is CA $286
CA $384 total
includes taxes & fees
May 12 - May 13
Paradise Point Resort & Spa
The Dana on Mission Bay
3.5 star property
8.6 out of 10, Excellent, (2424)
"Great stay! "
The price is CA $245
CA $276 total
includes taxes & fees
May 12 - May 13
The Dana on Mission Bay
Save an average of 15% on thousands of hotels when you're signed in
Omni San Diego Hotel
4.0 star property
9.0 out of 10, Wonderful, (1905)
"Great hotel! Perfect location. Very clean and comfortable. "
The price is CA $286
CA $368 total
includes taxes & fees
May 15 - May 16
Omni San Diego Hotel
California Suites Hotel
2.0 star property
7.0 out of 10, Good, (1314)
"I like their swimming pool,parking lot and you get your privacy "
The price is CA $135
CA $151 total
includes taxes & fees
May 12 - May 13
California Suites Hotel
San Diego Mission Bay Resort
4.0 star property
8.2 out of 10, Very good, (1013)
"Very beautiful property "
The price is CA $288
CA $385 total
includes taxes & fees
May 12 - May 13
San Diego Mission Bay Resort
Mission Bay Inn San Diego
2.5 star property
7.4 out of 10, Good, (1012)
"Easy access to the beach. Shout out to Patrick for my room upgrade. Dining room is clean and Staffs always restocking. Shower head flows so tight, needs opening flow up a little bit. Came back again, will return and would gladly recommend this place. "
The price is CA $122
CA $138 total
includes taxes & fees
May 27 - May 28
Mission Bay Inn San Diego
Hilton San Diego Bayfront
4.0 star property
8.4 out of 10, Very good, (1483)
"Peter was great at check in. After a night out I needed assistance to my room and a staff member whose name I did not get, he helped me to my room safely. Everyone was very kind and helpful."
The price is CA $213
CA $305 total
includes taxes & fees
May 28 - May 29
Hilton San Diego Bayfront
Best Western Plus Island Palms Hotel & Marina
3.0 star property
8.8 out of 10, Excellent, (1581)
"Excellent hospitality. Staff was very kind and the amenities were great. Played a game of pickle ball through by renting some equipment and lounged at the pool. Bartender made some good drinks. Would recommend this hotel and would come back to try the restaurant next time."
The price is CA $201
CA $227 total
includes taxes & fees
May 12 - May 13
Best Western Plus Island Palms Hotel & Marina
Days Inn by Wyndham San Diego Hotel Circle
3.0 star property
7.6 out of 10, Good, (1921)
"They need truck parking. Stalls are to small for full sized trucks."
The price is CA $149
CA $168 total
includes taxes & fees
May 12 - May 13
Days Inn by Wyndham San Diego Hotel Circle
DoubleTree by Hilton San Diego - Del Mar
4.0 star property
7.4 out of 10, Good, (1038)
"Clean and convenient "
The price is CA $173
CA $195 total
includes taxes & fees
May 27 - May 28
DoubleTree by Hilton San Diego - Del Mar
Palihotel San Diego
4.0 star property
8.8 out of 10, Excellent, (500)
"Incredibly cozy place in San Diego. "
The price is CA $150
CA $208 total
includes taxes & fees
May 12 - May 13
Palihotel San Diego
Gaslamp Plaza Suites
3.5 star property
8.8 out of 10, Excellent, (1006)
"Love this place "
The price is CA $143
CA $159 total
includes taxes & fees
May 12 - May 13
Gaslamp Plaza Suites
Catamaran Resort and Spa
4.0 star property
7.8 out of 10, Good, (1114)
"Loved the property! Got a first floor bay front room, totally worth it. Beautiful scenery, walks paths and beach access, food options everywhere. The staff were a little on the grumpy side aside from the bellhop and valet workers...we'll definitely stay again. "
The price is CA $286
CA $383 total
includes taxes & fees
May 12 - May 13
Catamaran Resort and Spa
Ocean Villa Inn
2.5 star property
8.2 out of 10, Very good, (1003)
"Great if you are traveling with pups "
The price is CA $115
CA $127 total
includes taxes & fees
May 16 - May 17
Ocean Villa Inn
Loews Coronado Bay Resort
4.0 star property
8.6 out of 10, Excellent, (1058)
"Nice property. Staff was great! "
The price is CA $299
CA $395 total
includes taxes & fees
May 19 - May 20
Loews Coronado Bay Resort
Pendry San Diego
5.0 star property
9.2 out of 10, Wonderful, (1004)
"Great location and nice view "
The price is CA $378
CA $494 total
includes taxes & fees
May 27 - May 28
Pendry San Diego
Kona Kai San Diego
4.0 star property
8.4 out of 10, Very good, (937)
"The resort was an amazing experience, right on the Marina with its own private beach, everything is literally in reach. The perfect getaway most definitely would book again. "
The price is CA $335
CA $447 total
includes taxes & fees
May 12 - May 13
Kona Kai San Diego
Holiday Inn Express San Diego Downtown, an IHG Hotel
2.5 star property
8.2 out of 10, Very good, (1005)
"Great stay. Wonderful breakfast options. "
The price is CA $196
CA $221 total
includes taxes & fees
May 27 - May 28
Holiday Inn Express San Diego Downtown, an IHG Hotel
Handlery Hotel
3.5 star property
7.8 out of 10, Good, (1568)
"I was in a quiet area."
The price is CA $149
CA $168 total
includes taxes & fees
May 12 - May 13
Handlery Hotel
Don't see what you're looking for?
See all available properties in Shelter Island
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Frequently asked questions

What's the area like around Shelter Island?

Shelter Island is located in a family-friendly area of San Diego known for its beautiful island views and great live music scene. If you're looking for a convenient place to stay, check out the 62 hotels and other accommodations you'll find within a mile.

Where is the best place to stay near Shelter Island?

Adjacent to Shelter Island, Kona Kai San Diego is one of the top choices for your stay based on our traveler data, and this hotel offers a marina and 2 outdoor pools. Other good choices within a short distance include Best Western Plus Island Palms Hotel & Marina and Humphreys Half Moon Inn.

How many hotels will I be able to find near Shelter Island?

Expedia has 62 hotels and other accommodations within a mile from Shelter Island.

If I need to cancel the hotel reservation for my stay near Shelter Island, will I receive a refund?

Yes! The majority of hotel room reservations are fully refundable provided that you cancel before the accommodation's cancellation deadline, which often is within 24-48 hours of your arrival date. If you have a reservation that's non-refundable, you may still be able to cancel and be given a refund within 24 hours of your booking. Put your dates in and click on "Search", then use the filter option "fully refundable" to view the top deals on offer near Shelter Island.

Where can I learn more about changing or cancelling my trip in the area near Shelter Island?

For more details about rescheduling or cancelling your stay near Shelter Island, click here.

What can I see and do near Shelter Island?

You might want to spend some time browsing the exhibits at USS Midway Museum, Maritime Museum of San Diego, or San Diego Air and Space Museum. Explore notable local landmarks like Hotel del Coronado, Point Loma Lighthouse, and Star of India. You can check out the local talent at Humphreys Concerts by the Bay, The Rady Shell at Jacobs Park, and San Diego Civic Theatre.