An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

Hotels in Mission Bay, San Diego

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Our top choices for Mission Bay hotels

Paradise Point Resort & Spa

Paradise Point Resort & Spa
4.0 star property
Mission Bay
8.8 out of 10, Excellent, (2,679 reviews)
"This was a beautiful place to stay. Right by the water, staff was very helpful, restaurant's were good"
United States
Myesha
The price is CA $419
CA $557 total
includes taxes & fees
Jul 6 - Jul 7
Paradise Point Resort & Spa

San Diego Mission Bay Resort

San Diego Mission Bay Resort
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,503 reviews)
"We have stayed here before, good location, clean rooms, great staff."
United States
Lance
The price is CA $365
CA $494 total
includes taxes & fees
Jul 6 - Jul 7
San Diego Mission Bay Resort

Hyatt Regency Mission Bay Spa and Marina

Hyatt Regency Mission Bay Spa and Marina
4.0 star property
Mission Bay
8.6 out of 10, Excellent, (1,625 reviews)
"Amazing place!"
United States
Yesenia
The price is CA $410
CA $547 total
includes taxes & fees
Jun 30 - Jul 1
Hyatt Regency Mission Bay Spa and Marina

The Dana on Mission Bay

The Dana on Mission Bay
3.5 star property
Mission Bay
9.0 out of 10, Wonderful, (4,376 reviews)
"Beautiful property, very helpful staff, great location"
United States
Jamie
The price is CA $353
CA $447 total
includes taxes & fees
Jun 30 - Jul 1
The Dana on Mission Bay

Valli Hi Motel

Valli Hi Motel
2.5 star property
28.8 km from Mission Bay
8.4 out of 10, Very good, (1,025 reviews)
"Great place to stay."
United States
Allan
The price is CA $118
CA $134 total
includes taxes & fees
Jul 5 - Jul 6
Valli Hi Motel

Best Western Chula Vista/Otay Valley Hotel

Best Western Chula Vista/Otay Valley Hotel
2.5 star property
26.7 km from Mission Bay
8.0 out of 10, Very good, (1,837 reviews)
"The stay was great, and breakfast was delicious"
United States
Katie
The price is CA $168
CA $185 total
includes taxes & fees
Jul 5 - Jul 6
Best Western Chula Vista/Otay Valley Hotel

Heritage Inn San Diego

Heritage Inn San Diego
2.0 star property
2.2 km from Mission Bay
7.2 out of 10, Good, (1,574 reviews)
"Great stay"
United States
Alyssa
The price is CA $95
CA $109 total
includes taxes & fees
Jul 30 - Jul 31
Heritage Inn San Diego

La Quinta Inn by Wyndham San Diego - Miramar

La Quinta Inn by Wyndham San Diego - Miramar
3.0 star property
22.2 km from Mission Bay
8.0 out of 10, Very good, (1,338 reviews)
"Clean rooms, helpful staff and great breakfast."
United States
isabel
The price is CA $181
CA $208 total
includes taxes & fees
Jul 5 - Jul 6
La Quinta Inn by Wyndham San Diego - Miramar

Heritage Inn La Mesa

Heritage Inn La Mesa
2.0 star property
18.2 km from Mission Bay
7.0 out of 10, Good, (1,505 reviews)
"Very clean, quiet and safe!!!"
United States
Roy
The price is CA $103
CA $114 total
includes taxes & fees
Jul 12 - Jul 13
Heritage Inn La Mesa

California Suites Hotel

California Suites Hotel
2.0 star property
7.8 km from Mission Bay
7.8 out of 10, Good, (2,673 reviews)
"Really great hotel for the price. We will definitely be staying here again with our little ones"
United States
Cristina
The price is CA $141
CA $161 total
includes taxes & fees
Jul 16 - Jul 17
California Suites Hotel

Kings Inn San Diego

Kings Inn San Diego
2.5 star property
4.9 km from Mission Bay
8.8 out of 10, Excellent, (3,737 reviews)
"Such an amazing place to stay at! hotel is so close to literally everything and the staff was amazing. Hotel was super clean and quiet definitely recommend!"
United States
Jasmyne
The price is CA $183
CA $210 total
includes taxes & fees
Jun 30 - Jul 1
Kings Inn San Diego

Wyndham Garden San Diego Near SeaWorld

Wyndham Garden San Diego Near SeaWorld
3.0 star property
2.6 km from Mission Bay
7.4 out of 10, Good, (4,176 reviews)
"Clean room, staff was very helpful, parking was easy and accessible!"
United States
Hector
The price is CA $183
CA $210 total
includes taxes & fees
Jul 1 - Jul 2
Wyndham Garden San Diego Near SeaWorld

Hotel Palmeras Chula Vista

Hotel Palmeras Chula Vista
2.0 star property
19.4 km from Mission Bay
7.2 out of 10, Good, (2,256 reviews)
"Great and affordable stay"
United States
Alex
The price is CA $108
CA $119 total
includes taxes & fees
Jul 29 - Jul 30
Hotel Palmeras Chula Vista

Pleasant Inn

Pleasant Inn
2.5 star property
8 km from Mission Bay
8.6 out of 10, Excellent, (1,465 reviews)
"Staff were very accommodating & friendly the room was clean i would stay there again!"
United States
Scott
The price is CA $154
CA $177 total
includes taxes & fees
Jul 19 - Jul 20
Pleasant Inn

Best Western Plus Marina Gateway Hotel

Best Western Plus Marina Gateway Hotel
3.5 star property
16.7 km from Mission Bay
9.2 out of 10, Wonderful, (3,896 reviews)
"Great stay"
United States
Cameron
The price is CA $226
CA $249 total
includes taxes & fees
Jun 30 - Jul 1
Best Western Plus Marina Gateway Hotel

Best Western Americana Inn

Best Western Americana Inn
2.5 star property
28.6 km from Mission Bay
8.8 out of 10, Excellent, (1,316 reviews)
"The breakfast was great, the staff was helpful, and the room was clean and spacious!"
United States
Christopher
The price is CA $174
CA $198 total
includes taxes & fees
Jul 5 - Jul 6
Best Western Americana Inn

Comfort Inn Chula Vista San Diego South

Comfort Inn Chula Vista San Diego South
2.5 star property
20.6 km from Mission Bay
8.2 out of 10, Very good, (1,574 reviews)
"The room was comfortable and conveniently located. Breakfast was great for the cost of our stay."
United States
Arsenia P
The price is CA $180
CA $198 total
includes taxes & fees
Jul 19 - Jul 20
Comfort Inn Chula Vista San Diego South

GreenTree Inn San Diego Mission Bay

GreenTree Inn San Diego Mission Bay
2.5 star property
Pacific Beach, 3 km from Mission Bay
8.0 out of 10, Very good, (2,203 reviews)
"THE BED WAS SO SOFT ROOM WAS SO CLEAN BREAKFAST WAS GREAT AND THE PRICE WAS KILLER FOR THE LOCATION really a great place to stay"
United States
Tyson
The price is CA $168
CA $193 total
includes taxes & fees
Jul 6 - Jul 7
GreenTree Inn San Diego Mission Bay

La Quinta Inn by Wyndham San Diego Chula Vista

La Quinta Inn by Wyndham San Diego Chula Vista
3.0 star property
20.7 km from Mission Bay
8.6 out of 10, Excellent, (1,640 reviews)
"Great place to stay at, would definitely stay there again."
United States
Jose
The price is CA $174
CA $191 total
includes taxes & fees
Jul 19 - Jul 20
La Quinta Inn by Wyndham San Diego Chula Vista

Sheraton San Diego Resort

Sheraton San Diego Resort
4.0 star property
6 km from Mission Bay
8.4 out of 10, Very good, (3,544 reviews)
"Great location and shuttle service to and from the airport."
Canada
Malinda
The price is CA $240
CA $348 total
includes taxes & fees
Jul 2 - Jul 3
Sheraton San Diego Resort
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most. Learn more about Mission Bay
Learn more about Mission Bay

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

Top Mission Bay Hotel Reviews

Frequently asked questions

What is Mission Bay like?
You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.
What's a favorite hotel to stay in Mission Bay?
Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort.
How many hotels should I expect to find in Mission Bay?
If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 46 Mission Bay hotels and other accommodations to choose from.
If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?
Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.
What is there to do around this San Diego neighborhood?
Enjoy a stroll along the shore at Mission and Pacific Beaches, Ski Beach, and North Cove Beach while you're in Mission Bay. You could also plan a visit to Mission Bay or Marina Village Conference Center while you're in the neighborhood. Mission Beach and Hotel Circle are some favorite places to visit in the area around Mission Bay. When you're sightseeing in San Diego, Crown Point Shores and The Dana On Mission Bay, BW Premier Collection are also worth a stop.