What is Mission Bay like?

You'll be sure to have fun visiting San Diego's Mission Bay neighborhood. Looking for sights you might find in a travel guide about Mission Bay? Consider a visit to Mission Bay while you're in the neighborhood.

What's a favorite hotel to stay in Mission Bay?

Based on our traveler data, Paradise Point Resort & Spa is one of the top choices for your stay in Mission Bay. This resort is a short 1-minute walk from Mission Bay, and it offers a marina and 5 outdoor pools. Other good options for your stay in the neighborhood include The Dana on Mission Bay and San Diego Mission Bay Resort .

How many hotels should I expect to find in Mission Bay?

If you're searching for places to stay in San Diego, Expedia has something to meet your needs with 37 Mission Bay hotels and other accommodations to choose from.

If I need to cancel my hotel reservation in Mission Bay, will I receive a refund?

Yes, you'll find most room reservations are refundable provided that you cancel prior to the accommodation's cancellation deadline, which is usually within 24-48 hours of your check-in date. If your reservation is non-refundable, you might be able to cancel it and be given a refund within a 24-hour period of your booking. Add your dates and click on "Search", then use the filter option "fully refundable" to view the best options available in Mission Bay.

What is there to do around this San Diego neighborhood?

Enjoy a stroll along the shore at Ski Beach, Mission and Pacific Beaches, and Crown Point Shores while you're in Mission Bay. You could also plan a visit to Mission Bay or North Cove Beach while you're in the neighborhood. Don't miss favorite places to visit in the surrounding area, such as Mission Beach, Marine Corps Recruit Depot, and Hotel Circle. When you're sightseeing in San Diego, The Dana On Mission Bay, BW Premier Collection and Marina Village Conference Center are also worth a stop.

10 Best Hotels in Mission Bay, San Diego for 2026

An aerial view of a coastal city with a marina, a large body of water, and a peninsula with buildings.

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Our top choices for Mission Bay hotels

A pool area with a hot tub, lounge chairs, and umbrellas.

1. The Dana on Mission Bay

Mission Bay

Satish

CA $318 total

includes taxes & fees

Nov 1 - Nov 2

A poolside view with a lounge chair, a towel, a tray with a drink and a coconut, and a pool with palm trees in the background.

2. San Diego Mission Bay Resort

Mission Bay

brittany

CA $434 total

includes taxes & fees

Oct 31 - Nov 1

An aerial view of a resort with a central swimming pool, palm trees, and a view of the ocean and beach.

3. Paradise Point Resort & Spa

Mission Bay

Jesse

CA $416 total

includes taxes & fees

Nov 1 - Nov 2

A resort pool with a lazy river, palm trees, and a view of the ocean.

4. Hyatt Regency Mission Bay Spa and Marina

Mission Bay

Dain Mitsu

CA $421 total

includes taxes & fees

Oct 28 - Oct 29

A hotel with a central courtyard, palm trees, and a fountain.

5. Hilton Garden Inn San Diego Old Town/SeaWorld Area

Old Town San Diego, 3.1 km from Mission Bay

Nayibe

CA $220 total

includes taxes & fees

Oct 26 - Oct 27

6. Comfort Inn San Diego - SeaWorld Area

2.8 km from Mission Bay

Yesenia

CA $174 total

includes taxes & fees

Oct 27 - Oct 28

A modern dining area with wooden tables and chairs, a central bar area, and a view of the city through large windows.

7. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

North Pacific Beach, 3.5 km from Mission Bay

Lauren

CA $177 total

includes taxes & fees

Nov 1 - Nov 2

A modern building with multiple windows, outdoor seating, and a chessboard.

8. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

2.8 km from Mission Bay

Xuan

CA $254 total

includes taxes & fees

Oct 14 - Oct 15

A living room with a large window, a flat-screen TV, and a patterned rug.

9. GreenTree Inn San Diego Mission Bay

Pacific Beach, 3 km from Mission Bay

Denise

CA $180 total

includes taxes & fees

Oct 8 - Oct 9

An outdoor patio area with tables and chairs, string lights, and a building with balconies.

10. Fairfield Inn & Suites San Diego Old Town

Old Town San Diego, 4.1 km from Mission Bay

Timothy

CA $227 total

includes taxes & fees

Oct 25 - Oct 26

A modern hotel room with a large bed, bedside tables, a desk, and a wardrobe.

11. Holiday Inn Express San Diego Airport - Old Town by IHG

4.8 km from Mission Bay

Patricia

CA $259 total

includes taxes & fees

Oct 27 - Oct 28

A hotel breakfast area with a long counter displaying various food items, including fruits, pastries, and a coffee station.

12. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

3.6 km from Mission Bay

Steve

CA $224 total

includes taxes & fees

Oct 22 - Oct 23

A modern hotel lobby with a central seating area, a bar, and a large window providing natural light.

13. Wyndham Garden San Diego Near SeaWorld

2.6 km from Mission Bay

Nayla

CA $172 total

includes taxes & fees

Oct 29 - Oct 30

A building with a "Bienvenidos" sign, palm trees, and a well-maintained garden.

14. Old Town Inn

3.5 km from Mission Bay

Cindy

CA $243 total

includes taxes & fees

Nov 6 - Nov 7

A spacious lobby with a large seating area, a wooden ceiling, and large windows offering a view of the outdoor patio area.

15. Hampton Inn & Suites San Diego Airport Liberty Station

5.3 km from Mission Bay

Ana Lopez

CA $281 total

includes taxes & fees

Oct 26 - Oct 27

A modern dining area with multiple tables and chairs, large windows, and artwork on the walls.

16. Comfort Inn San Diego Old Town

Old Town San Diego, 4 km from Mission Bay

James

CA $181 total

includes taxes & fees

Nov 1 - Nov 2

A hotel lobby with a waterfall feature, outdoor seating area, and multiple floors with balconies.

17. Crowne Plaza San Diego - Mission Valley by IHG

4 km from Mission Bay

Chris

CA $194 total

includes taxes & fees

Oct 12 - Oct 13

A multi-story hotel with a lobby, outdoor seating, and a well-lit entrance.

18. The Alcala Hotel Mission Valley/Seaworld

3.6 km from Mission Bay

Kori

CA $135 total

includes taxes & fees

Oct 7 - Oct 8

A modern lobby with a stone wall, blue sofas, a reception desk, and a staircase.

19. Kings Inn San Diego

4.9 km from Mission Bay

Armando

CA $154 total

includes taxes & fees

Oct 25 - Oct 26

A pool area with lounge chairs and palm trees.

20. Best Western Plus Hacienda Hotel Old Town

Old Town San Diego, 3.7 km from Mission Bay

Glenna

CA $235 total

includes taxes & fees

Oct 25 - Oct 26

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Where to stay in Mission Bay

Find the best Mission Bay areas and neighborhoods for the activities you enjoy most. Learn more about Mission Bay

A large stadium with the sign "Cobo Park" and palm trees around it.

Downtown San Diego

Cultural and financial hub, Downtown San Diego boasts the Symphony, Opera, theaters, museums, and historic sites like Gaslamp Quarter. Enjoy diverse shops, dining, nightlife, and convenient public transport options.

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A pier extending into the ocean with buildings at the end, under a partly cloudy sky.

Pacific Beach

Boasting a lively nightlife scene, Pacific Beach offers miles of sandy shores, a bustling 3.2-mile boardwalk, and attractions like Crystal Pier and Kate Sessions Park. Enjoy local shops, bars, and eateries along the vibrant walkway.

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A coastal cityscape with a long sandy beach, a pier, and dense urban buildings.

Mission Beach

Spanning nearly two miles of oceanfront, this sandbar community offers sunbathing, surfing, and beach volleyball, with nearby attractions like Belmont Park's Giant Dipper Roller Coaster and SeaWorld in Mission Bay Park.

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Gaslamp Quarter

Downtown San Diego's historic district boasts Victorian-era buildings, now housing vibrant restaurants, shops, and entertainment venues. Stroll from Broadway to Harbor Drive, and 4th to 6th Avenue, admiring the newly installed gaslamps at Market Street.

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A beach with palm trees, a hotel, and people enjoying the sand and water.

Ocean Beach

Ocean Beach is known for its stunning beaches, and with sights like Ocean Beach and Dog Beach, you won't get bored spending a day wandering around this part of San Diego.

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Top Mission Bay Hotel Reviews

Sheraton San Diego Resort

10/10 Excellent

"Good service nice .crean rooms"

Hotels in Mission Bay, San Diego

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Our top choices for Mission Bay hotels

1. The Dana on Mission Bay

2. San Diego Mission Bay Resort

3. Paradise Point Resort & Spa

4. Hyatt Regency Mission Bay Spa and Marina

5. Hilton Garden Inn San Diego Old Town/SeaWorld Area

6. Comfort Inn San Diego - SeaWorld Area

7. La Quinta Inn & Suites by Wyndham San Diego Mission Bay

8. Hampton Inn & Suites by Hilton San Diego SeaWorld Near Old Town

9. GreenTree Inn San Diego Mission Bay

10. Fairfield Inn & Suites San Diego Old Town

11. Holiday Inn Express San Diego Airport - Old Town by IHG

12. Best Western Inn & Suites San Diego – Zoo/SeaWorld Area

13. Wyndham Garden San Diego Near SeaWorld

14. Old Town Inn

15. Hampton Inn & Suites San Diego Airport Liberty Station

16. Comfort Inn San Diego Old Town

17. Crowne Plaza San Diego - Mission Valley by IHG

18. The Alcala Hotel Mission Valley/Seaworld

19. Kings Inn San Diego

20. Best Western Plus Hacienda Hotel Old Town

Where to stay in Mission Bay

Downtown San Diego

Pacific Beach

Mission Beach

Gaslamp Quarter

Ocean Beach

Top Mission Bay Hotel Reviews

Sheraton San Diego Resort

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