Title: Hotels by Independent in San Juan Island from CA $105 | Expedia.ca [San Juan Island Travel Guide](https://expedia.ca/San-Juan-Island.dx6054490)[Hotels in San Juan Island](https://expedia.ca/San-Juan-Island-Hotels.d6054490.Travel-Guide-Hotels)[Vacation Rentals in San Juan Island](https://expedia.ca/San-Juan-Island-Vacation-Rentals.d6054490.Travel-Guide-VacationRentals)[Flights to San Juan Island](https://expedia.ca/Cheap-Flights-To-San-Juan-Island.d6054490.Travel-Guide-Flights)[Things to do in San Juan Island](https://expedia.ca/Things-To-Do-In-San-Juan-Island.d6054490.Travel-Guide-Activities)[San Juan Island Car Rentals](https://expedia.ca/Car-Rentals-In-San-Juan-Island.d6054490.Car-Rental-Guide)[San Juan Island Vacation Packages](https://expedia.ca/San-Juan-Island.d6054490.Destination-Travel-Guides) ![San Juan Island which includes a bay or harbour, sailing and boating](https://images.trvl-media.com/place/1248/c87f5637-9933-4199-a829-107b6a04e0b2.jpg?impolicy=fcrop&w=1200&h=500&q=medium) ![](https://images.trvl-media.com/place/1248/c87f5637-9933-4199-a829-107b6a04e0b2.jpg?impolicy=fcrop&w=1200&h=500&q=medium) - ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__calendar_shield.svg) ### Change your mind Book hotels with free cancellation - ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__deals.svg) ### Treat yourself Sign in to save 10% or more on thousands of hotels [Sign in](https://www.expedia.ca/login) - ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__bed.svg) ### Be picky Search almost a million properties worldwide ## Check prices for these dates Tonight [Feb 10 - Feb 11](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2026-02-10&endDate=2026-02-11&adults=2&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Tomorrow [Feb 11 - Feb 12](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2026-02-11&endDate=2026-02-12&adults=2&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) This weekend [Feb 13 - Feb 15](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2026-02-13&endDate=2026-02-15&adults=2&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Next weekend [Feb 20 - Feb 22](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2026-02-20&endDate=2026-02-22&adults=2&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) ## Our top choices for San Juan Island Independent ![Front of property](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/e4b1417f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/ab9b115f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Bar (on property)](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/2ed1f570.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/785ac2f2.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Anacortes Ship Harbor Inn [](https://www.expedia.ca/Mount-Vernon-Hotels-Anacortes-Ship-Harbor-Inn.h1311525.Hotel-Information) Anacortes 9.0/10 Wonderful (1,000 reviews) "Great front desk agent! Very intimate environment and clean rooms..." ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Bill CA $121 CA $134 total includes taxes & fees Feb 24 - Feb 25 [](https://www.expedia.ca/Mount-Vernon-Hotels-Anacortes-Ship-Harbor-Inn.h1311525.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/bb3f2332.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/b0252a8f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/e2eb8df2.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Staircase](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/1e1b4076.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Auld Holland Inn [](https://www.expedia.ca/Oak-Harbor-Hotels-Auld-Holland-Inn.h1668426.Hotel-Information) Oak Harbor 8.2/10 Very good (1,000 reviews) "Always a great stay" ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) James CA $118 CA $131 total includes taxes & fees Feb 12 - Feb 13 [](https://www.expedia.ca/Oak-Harbor-Hotels-Auld-Holland-Inn.h1668426.Hotel-Information) ![Lobby](https://images.trvl-media.com/lodging/1000000/10000/1600/1576/28b1ef64.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby sitting area](https://images.trvl-media.com/lodging/1000000/10000/1600/1576/b15fdc7e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Blackout drapes, free WiFi, bed sheets](https://images.trvl-media.com/lodging/1000000/10000/1600/1576/65c90a75.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Gazebo](https://images.trvl-media.com/lodging/1000000/10000/1600/1576/36b12a0a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Coachman Inn & Suites [](https://www.expedia.ca/Oak-Harbor-Hotels-Coachman-Inn-Suites.h1576.Hotel-Information) Oak Harbor 9.2/10 Wonderful (1,001 reviews) "Staff are very friendly and helpful." ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Lin CA $167 CA $186 total includes taxes & fees Feb 12 - Feb 13 [](https://www.expedia.ca/Oak-Harbor-Hotels-Coachman-Inn-Suites.h1576.Hotel-Information) ![Cafe](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/ce853ab0.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Outdoor spa tub](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/7166daf1.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/98210912.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Gift shop](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/f8475bb5.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Friday Harbor Suites [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-Suites.h1189744.Hotel-Information) Friday Harbor 8.4/10 Very good (1,000 reviews) "Great room, great staff, love the hotel. This will be our go to for visits here! " ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Nathaniel CA $245 CA $271 total includes taxes & fees Feb 27 - Feb 28 [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-Suites.h1189744.Hotel-Information) ![Property grounds](https://images.trvl-media.com/lodging/9000000/8470000/8460900/8460818/69b37946.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Premium bedding, desk, laptop workspace, iron/ironing board](https://images.trvl-media.com/lodging/9000000/8470000/8460900/8460818/b478cd1e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/9000000/8470000/8460900/8460818/f26acb41.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/9000000/8470000/8460900/8460818/dff58a22.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Anacortes Inn [](https://www.expedia.ca/Mount-Vernon-Hotels-Anacortes-Inn.h8460818.Hotel-Information) Anacortes 8.8/10 Excellent (422 reviews) "Lovely room and the best staff. My second visit and I can positively recommend " ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Valerie CA $134 CA $151 total includes taxes & fees Feb 12 - Feb 13 [](https://www.expedia.ca/Mount-Vernon-Hotels-Anacortes-Inn.h8460818.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/14000000/13140000/13137200/13137122/a6aaee68.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Standard Room, 2 Queen Beds](https://images.trvl-media.com/lodging/14000000/13140000/13137200/13137122/fea7a302.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/14000000/13140000/13137200/13137122/45229b5b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Fitness facility](https://images.trvl-media.com/lodging/14000000/13140000/13137200/13137122/c750794e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### The Marina Inn [](https://www.expedia.ca/Mount-Vernon-Hotels-The-Marina-Inn.h13137122.Hotel-Information) Anacortes 9.6/10 Exceptional (1,000 reviews) "Nice stay all around, staff, room and breakfast were all great." ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Marilyn CA $142 CA $160 total includes taxes & fees Feb 12 - Feb 13 [](https://www.expedia.ca/Mount-Vernon-Hotels-The-Marina-Inn.h13137122.Hotel-Information) ![Flat-screen TV, fireplace](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/f063d289.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/20132543.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Aerial view](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/a02970e7.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Water view](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/9599ebec.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Snug Harbor Resort [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort.h34844071.Hotel-Information) Friday Harbor 9.8/10 Exceptional (454 reviews) "Great Winter get-away location. " ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Nancy CA $279 CA $308 total includes taxes & fees Feb 24 - Feb 25 [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort.h34844071.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/8000000/7760000/7758600/7758596/4275dea4.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Mt. Baker Suite](https://images.trvl-media.com/lodging/8000000/7760000/7758600/7758596/50c45ad9.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby sitting area](https://images.trvl-media.com/lodging/8000000/7760000/7758600/7758596/687be17d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lounge](https://images.trvl-media.com/lodging/8000000/7760000/7758600/7758596/dc823c93.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Sunrise Inn Villas and Suites [](https://www.expedia.ca/Mount-Vernon-Hotels-Sunrise-Inn-Villas-And-Suites.h7758596.Hotel-Information) Anacortes 8.6/10 Excellent (683 reviews) "Great rooms and very friendly staff. " ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Virginia CA $125 CA $154 total includes taxes & fees Feb 18 - Feb 19 [](https://www.expedia.ca/Mount-Vernon-Hotels-Sunrise-Inn-Villas-And-Suites.h7758596.Hotel-Information) ![Hypo-allergenic bedding, blackout drapes, iron/ironing board, free WiFi](https://images.trvl-media.com/lodging/67000000/66900000/66892300/66892217/ba84a198.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property](https://images.trvl-media.com/lodging/67000000/66900000/66892300/66892217/212edbb0.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exclusive Room (Salish Grand Suite) | Bathroom](https://images.trvl-media.com/lodging/67000000/66900000/66892300/66892217/8640314a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exclusive Room (Orcas Deluxe Suite) | Private kitchen](https://images.trvl-media.com/lodging/67000000/66900000/66892300/66892217/ddb9f222.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Salish Inn [](https://www.expedia.ca/Mount-Vernon-Hotels-Salish-Inn.h66892217.Hotel-Information) Anacortes 8.4/10 Very good (608 reviews) "The beds were comfortable and sheets were soft. The room has all you need but very basic. Easy parking and location is good. " ![Canada](https://a.travel-assets.com/egds/marks/flags/ca.svg) Christina CA $123 CA $159 total includes taxes & fees Feb 16 - Feb 17 [](https://www.expedia.ca/Mount-Vernon-Hotels-Salish-Inn.h66892217.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/6000000/5770000/5765400/5765350/26f01d23.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby sitting area](https://images.trvl-media.com/lodging/6000000/5770000/5765400/5765350/aebef7d2.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Deluxe Room, 2 Queen Beds](https://images.trvl-media.com/lodging/6000000/5770000/5765400/5765350/2ab1b3f4.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Free daily continental breakfast](https://images.trvl-media.com/lodging/6000000/5770000/5765400/5765350/9b4fbc59.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Anaco Bay Inn [](https://www.expedia.ca/Mount-Vernon-Hotels-Anaco-Bay-Inn.h5765350.Hotel-Information) Anacortes 8.0/10 Very good (1,008 reviews) "Staff was excellent" ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) craig CA $95 CA $105 total includes taxes & fees Feb 12 - Feb 13 [](https://www.expedia.ca/Mount-Vernon-Hotels-Anaco-Bay-Inn.h5765350.Hotel-Information) Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply. [View all properties](https://expedia.ca/Hotel-Search?startDate=2026-02-25&endDate=2026-02-26®ionId=6054490&adults=2&sort=RECOMMENDED&openPlayBack=true) ![](https://a.travel-assets.com/pricing-claim/sparkle_dark.svg) Save an average of 15% on thousands of hotels when you're signed in [Sign in ](https://expedia.ca/user/signin?ckoflag=0&uurl=e3id%3Dredr%26rurl%3D%2FSan-Juan-Island-Hotels-Independent.0-0-d6054490--bIndependent.Travel-Guide-Filter-Hotels)[ Sign up, it's free ](https://expedia.ca/signup?enable_registration=true&+=&uurl=e3id%3Dredr%26rurl%3D%2FSan-Juan-Island-Hotels-Independent.0-0-d6054490--bIndependent.Travel-Guide-Filter-Hotels) ## Top San Juan Island Hotel Reviews ![Anacortes Ship Harbor Inn](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/c6e1743f_y.jpg) ### Anacortes Ship Harbor Inn 10/10 Excellent "Quiet, clean, pleasant staff" [](https://expedia.ca/Mount-Vernon-Hotels-Anacortes-Ship-Harbor-Inn.h1311525.Hotel-Information) ![Waterfront Home - Watch a Sunset from the Hot Tub, Private Beach, Mooring Buoy](https://images.trvl-media.com/lodging/34000000/33500000/33493900/33493802/0ca93884_y.jpg) ### Waterfront Home - Watch a Sunset from the Hot Tub, Private Beach, Mooring Buoy 10/10 Excellent "Lovely stay at this house! Really enjoyed the house, the large yard, beautiful views of the bay, and the quiet peacefulness of the surroundings of roche harbor. The beds were comfortable, and the kitchen was very well stocked for cooking some meals at home. We saw seals, eagles roosting in nearby trees, and it was close to downtown Friday harbor. Great place! " [](https://expedia.ca/Friday-Harbor-Hotels-Waterfront-Home-Watch-A-Sunset-From-The-Hot-Tub.h33493802.Hotel-Information) ![Auld Holland Inn](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/bb3f2332_y.jpg) ### Auld Holland Inn 10/10 Excellent "It was great." [](https://expedia.ca/Oak-Harbor-Hotels-Auld-Holland-Inn.h1668426.Hotel-Information) ![Anaco Bay Inn](https://images.trvl-media.com/lodging/6000000/5770000/5765400/5765350/26f01d23_y.jpg) ### Anaco Bay Inn 10/10 Excellent "Good value." [](https://expedia.ca/Mount-Vernon-Hotels-Anaco-Bay-Inn.h5765350.Hotel-Information) ![Snug Harbor Resort](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/5b4be07d_y.jpg) ### Snug Harbor Resort 10/10 Excellent "Very clean, spacious and has everything you need to spend 2 or 3 days disconnecting from day to day life and connecting with nature. I’d love to come back again soon! Staff were very informative and friendly. " [](https://expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort.h34844071.Hotel-Information) ![Coachman Inn & Suites](https://images.trvl-media.com/lodging/1000000/10000/1600/1576/90febc8a_y.jpg) ### Coachman Inn & Suites 10/10 Excellent "Clean room " [](https://expedia.ca/Oak-Harbor-Hotels-Coachman-Inn-Suites.h1576.Hotel-Information) ![Anacortes Inn](https://images.trvl-media.com/lodging/9000000/8470000/8460900/8460818/b20aae51_y.jpg) ### Anacortes Inn 10/10 Excellent "Lovely room and the best staff. My second visit and I can positively recommend " [](https://expedia.ca/Mount-Vernon-Hotels-Anacortes-Inn.h8460818.Hotel-Information) ![Best Western Plus Oak Harbor Hotel & Conference Center](https://images.trvl-media.com/lodging/1000000/10000/7100/7085/w3837h2557x3y3-bbd59474_y.jpg) ### Best Western Plus Oak Harbor Hotel & Conference Center 10/10 Excellent "Clean room, great coffee/hot coco machine and water anytime you want at front desk. Will be back!" [](https://expedia.ca/Oak-Harbor-Hotels-Best-Western-Plus-Oak-Harbor-Hotel-Conference-Center.h7085.Hotel-Information) ![Friday Harbor Suites](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/4322486e_y.jpg) ### Friday Harbor Suites 10/10 Excellent "Staff was the best and the beds were comfortable. " [](https://expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-Suites.h1189744.Hotel-Information) ## Explore a world of travel with Expedia - Lodging - Flights - Packages - Cars - Vacation Rental - Other - More ways to book - [5 Star Hotels in Friday Harbor ](https://www.expedia.ca/5Star-Friday-Harbor-Hotels.s50-0-d1248.Travel-Guide-Filter-Hotels) - [Best Western Hotels in Anacortes ](https://www.expedia.ca/Anacortes-Hotels-Best-Western.0-0-d2710--bBestWestern.Travel-Guide-Filter-Hotels) - [Marriott Hotels & Resorts in Anacortes ](https://www.expedia.ca/Anacortes-Hotels-Marriott-Hotels-Resorts.0-0-d2710--bMarriottHotelsResorts.Travel-Guide-Filter-Hotels) - [Motel 6 Hotels in Anacortes ](https://www.expedia.ca/Anacortes-Hotels-Motel-6.0-0-d2710--bMotel6.Travel-Guide-Filter-Hotels) - [Coast Hotels in Bellingham ](https://www.expedia.ca/Bellingham-Hotels-Coast-Hotels.0-0-d602922--bCoastHotels.Travel-Guide-Filter-Hotels) - [Hilton Hotels in Bellingham ](https://www.expedia.ca/Bellingham-Hotels-Hilton-Hotels.0-0-d602922--bHiltonHotels.Travel-Guide-Filter-Hotels) - 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