Beginning of main content
Trip Type
Flight 1
Flight 2
Flight 3
Flight 4
Flight 5

Search 590,000 properties worldwide.

Search over a million flights, hotels, packages, and more

No Expedia cancellation fee to change or cancel almost any hotel reservation.


Featured Heraklion Independent Hotels

See all 791 Hotels in Heraklion
GDM Megaron

GDM Megaron

9, D. Beaufort Street, Heraklion
5.0 out of 5.0
4.8 out of 5 (459 reviews)
Best hotel in Heraklion I just spent a month at the Megaron hotel and was extremely comfortable and well taken care of. The … - 
Lato Boutique Hotel

Lato Boutique Hotel

15 Epimenidou Street, Heraklion
3.5 out of 5.0
4.4 out of 5 (688 reviews)
Fantastic staff The staff will bend over backwards for you. Very friendly - 
Marin Dream

Marin Dream

46, Epimenidou str, Heraklion
3.5 out of 5.0
4.1 out of 5 (435 reviews)
Convenient for centre of town and the bus station. Great view from the restaurant. - 
Aquila Atlantis Hotel

Aquila Atlantis Hotel

2 Ygias Street, Heraklion
5.0 out of 5.0
4.4 out of 5 (288 reviews)
Good central location The hotel was ok but facilities were a bit lacking considering the star rating. No ironing board on … - 

C$120

C$120
Mitsis Laguna Resort & Spa - All Inclusive

Mitsis Laguna Resort & Spa - All Inclusive

Anissaras, Hersonissos
5.0 out of 5.0
4.3 out of 5 (147 reviews)
Excellent place and outstanding service. Excellent place and outstanding service. Great food. - 
Infinity City Boutique Hotel

Infinity City Boutique Hotel

Ariadnis 9, Heraklion
4.0 out of 5.0
4.5 out of 5 (48 reviews)
Close to amenities Within view of Heraklion Port, within walking distance (500m) of the town centre. Good transport li … - 

C$65

C$65
Stella Island Luxury resort & Spa - Adults Only

Stella Island Luxury resort & Spa - Adults Only

Analipsi, Analipsi, Hersonissos
4.5 out of 5.0
4.7 out of 5 (12 reviews)
Relaxing Get away. Stella Island is a stunning hotel. Very welcoming reception staff. Rooms were lovely, pillows and b … - 
Kronos Hotel

Kronos Hotel

2, Sof. Venizelou Str. and M. Agarathou, Heraklion
2.5 out of 5.0
4.2 out of 5 (181 reviews)
Nice stay. Sea view Nice stay. Friendly helpful staff. Good sea view. Very close to town centre. - 
Amazones Village Suites

Amazones Village Suites

Lyktou Road, Hersonissos
4.5 out of 5.0
4.1 out of 5 (215 reviews)
Staff were very helpful and friendly, and the service was excellent. - 
Atrion Hotel

Atrion Hotel

9 Chronaki Street, Heraklion
3.5 out of 5.0
4.2 out of 5 (253 reviews)
good hotel to stay ib the city. near the hotel bazar (3 '), restaurants, seacoast - 

Recently booked Heraklion hotels

Lato Boutique Hotel
3.5 out of 5.0
Last booking: 7 hours ago
Creta Blue Boutique Hotel
4.5 out of 5.0
Last booking: 11 hours ago
Sergios Hotel - All inclusive
3.5 out of 5.0
Last booking: 19 hours ago
Aquila Atlantis Hotel
5.0 out of 5.0
Last booking: 24 hours ago
GDM Megaron
5.0 out of 5.0
Last booking: 26 hours ago
Mirabello Hotel
2.5 out of 5.0
Last booking: 32 hours ago

Independent Heraklion Hotel Guide

Some globe-trotters will stay anywhere that offers a cheap deal, but others prefer to book with their favourite chain. Thanks to Expedia.ca’s range of Independent in Heraklion, Crete Island, you no longer have to choose between the two. Known for their comfortable rooms and friendly staff, each of the best Independent Heraklion promises a top quality travel experience.