Find hotels near Mission Bay, San Diego from CA $98

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Top Hotels Close to Mission Bay

Aerial view
Paradise Point Resort & Spa
4.0 star property
8.4 out of 10, Very good, (1816)
"Great hideaway. Had a wonderful vacation. "
The price is CA $300
CA $400 total
includes taxes & fees
May 27 - May 28
Paradise Point Resort & Spa
Aerial view
The Dana on Mission Bay
3.5 star property
8.6 out of 10, Excellent, (2435)
"The rooms were very nice and look like they have been remodeled. "
The price is CA $244
CA $275 total
includes taxes & fees
May 19 - May 20
The Dana on Mission Bay
Pool
California Suites Hotel
2.0 star property
7.0 out of 10, Good, (1321)
"I love where the area was because it was accessible to get to the places I needed to go. "
The price is CA $134
CA $151 total
includes taxes & fees
May 21 - May 22
California Suites Hotel
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Outdoor pool
Mission Bay Inn San Diego
2.5 star property
7.4 out of 10, Good, (1006)
"For the price and the free breakfast, this is such a good deal. "
The price is CA $122
CA $137 total
includes taxes & fees
May 28 - May 29
Mission Bay Inn San Diego
Lobby
Catamaran Resort and Spa
4.0 star property
7.8 out of 10, Good, (1106)
"A very cool retro resort with tiki-tropical theme. The grounds are magical with their cou ponds and plantings. The hotel is a bit beat up to be charging such incredibly high prices tho, pansy’s over folks come on"
The price is CA $340
CA $444 total
includes taxes & fees
May 22 - May 23
Catamaran Resort and Spa
Balcony view
La Jolla Shores Hotel
3.0 star property
8.8 out of 10, Excellent, (1264)
"I am a regular at the Shores. I always stay there because it is right on the beach and well managed. The front desk staff and bellmen are so polite and helpful. The Bar is iconic with its big windows and great service! "
The price is CA $417
CA $519 total
includes taxes & fees
Jun 9 - Jun 10
La Jolla Shores Hotel
Outdoor pool, pool umbrellas, sun loungers
Handlery Hotel
3.5 star property
7.8 out of 10, Good, (1571)
"I was in a quiet area."
The price is CA $134
CA $156 total
includes taxes & fees
May 16 - May 17
Handlery Hotel
Outdoor pool, open 7:00 AM to 10:00 PM, sun loungers
Old Town Inn
2.5 star property
9.2 out of 10, Wonderful, (1349)
"was very close to where we wanted to be"
The price is CA $239
CA $269 total
includes taxes & fees
May 19 - May 20
Old Town Inn
Outdoor pool
Hampton Inn San Diego/Mission Valley
2.5 star property
8.6 out of 10, Excellent, (1000)
"Employees were great!! Property was clean. The rooms needs to be updated. Our curtains were ripped and missing a pulley stick to close the curtains. Furniture in the rooms are old and scratched or damage. "
The price is CA $185
CA $208 total
includes taxes & fees
May 27 - May 28
Hampton Inn San Diego/Mission Valley
Meeting facility
Four Points by Sheraton San Diego
3.5 star property
7.8 out of 10, Good, (1000)
"Rooms were very noisy , with being able to hear neighbors all night long. People were talking and yelling at all hours, and management did nothing to stop them."
The price is CA $171
CA $192 total
includes taxes & fees
May 30 - May 31
Four Points by Sheraton San Diego
Outdoor pool, open 9:00 AM to 10:00 PM, sun loungers
Residence Inn by Marriott San Diego Sorrento Mesa/Sorrento Valley
3.0 star property
9.0 out of 10, Wonderful, (556)
"A little piece of home on the road. Wish we could have stayed a week. Service, room, and food were great."
The price is CA $206
CA $233 total
includes taxes & fees
May 23 - May 24
Residence Inn by Marriott San Diego Sorrento Mesa/Sorrento Valley
BBQ/picnic area
Holiday Inn Express & Suites La Jolla – Windansea Beach, an IHG Hotel
2.5 star property
8.8 out of 10, Excellent, (1002)
"Property is a great location. Nice walking distance to the beach. The breakfast was pretty good. Just sometimes it gets a bit noisy staying on the 1st floor late at night. Overall great stay!! Would come back. "
The price is CA $231
CA $260 total
includes taxes & fees
May 19 - May 20
Holiday Inn Express & Suites La Jolla – Windansea Beach, an IHG Hotel
Exterior
E-Z 8 Motel Old Town
2.5 star property
5.8 out of 10, (2026)
"My room was very clean, and there staff are very nice and helpful hight security made everything safe at night for guests, if like me a reasonable rate choices together with a very clean environment..."
The price is CA $119
CA $134 total
includes taxes & fees
May 16 - May 17
E-Z 8 Motel Old Town
Lobby
Riverleaf Inn Mission Valley
2.5 star property
5.8 out of 10, (1204)
"The front clerk is very polite and helpful"
The price is CA $129
CA $145 total
includes taxes & fees
May 27 - May 28
Riverleaf Inn Mission Valley
Front of property - evening/night
Pantai Inn
3.5 star property
9.4 out of 10, Exceptional, (883)
"Great"
The price is CA $422
CA $504 total
includes taxes & fees
May 16 - May 17
Pantai Inn
Aerial view
Grande Colonial Hotel
4.0 star property
9.4 out of 10, Exceptional, (1000)
"Location in the heart of the cove is the perfect place to experience La Jolla. Our room in the main building was more than ample and we especially appreciated that valet parking was included. Restaurant is pricey but well worth the price, Just a lovely time in a historic spot."
The price is CA $340
CA $452 total
includes taxes & fees
May 19 - May 20
Grande Colonial Hotel
Lobby
Travelodge by Wyndham San Diego SeaWorld
2.0 star property
5.6 out of 10, (1001)
"We checked in late. The late night attendant said I would have to leave my ID because their system was updating. I wasn't going to sleep without my ID so I waited for him to call me when the system was back up."
The price is CA $98
CA $111 total
includes taxes & fees
May 22 - May 23
Travelodge by Wyndham San Diego SeaWorld
Outdoor pool
Hampton Inn San Diego-Kearny Mesa
2.5 star property
9.0 out of 10, Wonderful, (1000)
"Very convenient and clean place to stay for a quick trip to San Diego "
The price is CA $211
CA $238 total
includes taxes & fees
May 21 - May 22
Hampton Inn San Diego-Kearny Mesa
Ocean views
Cormorant Boutique Hotel
2.0 star property
8.2 out of 10, Very good, (80)
"I need to replace where me and my pet could stay the night. This place is located right across from La Jolla Cove right in the middle of all the shops, and the hustle and bustle. My room had a balcony that gave me a beautiful view of the ocean. The room was nice but extremely tight. The bed I found uncomfortable. It was either memory foam, or some sort of sinky material. The pillows also were very squishy. The effect was like being stuck in quicksand and very very hot. I would’ve preferred a...
The price is CA $258
CA $286 total
includes taxes & fees
May 28 - May 29
Cormorant Boutique Hotel
Property grounds
Private Ocean Beach Studio w/ Ocean Views!
10.0 out of 10, Exceptional, (15)
"We took a long weekend to visit our son who recently moved to San Diego. This is a very nice place to stay with a lovely view of the ocean and a good central location."
Private Ocean Beach Studio w/ Ocean Views!
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Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Frequently asked questions

What's the area like around Mission Bay?

Mission Bay is located in a family-friendly area of San Diego known for its array of dining options and popular zoo. If you're looking for a convenient place to stay, check out the 62 hotels and other accommodations you'll find within a mile.

Where is the best place to stay near Mission Bay?

Paradise Point Resort & Spa is one of the top choices for your stay based on our traveler data, and this resort offers a marina and 5 outdoor pools. It's located just a short 0.7 mi (1.2 km) from Mission Bay. Another good option is San Diego Mission Bay Resort, located just 1 mi (1.6 km) away.

How many hotels can I expect to find close to Mission Bay?

Expedia has 62 hotels and other accommodations within a mile from Mission Bay.

If I need to cancel the hotel reservation for my stay near Mission Bay, will I receive a refund?

Yes! You'll find that most hotel bookings are fully refundable provided that you cancel before the hotel’s cancellation deadline, which in most cases is within 24 or 48 hours of your arrival date. If your reservation is non-refundable, you may still be able to cancel and be given a refund within 24 hours of booking. Enter your dates, click on "Search", then filter by "fully refundable" to review the top deals on offer near Mission Bay.

Where can I learn more about changing or cancelling my trip in the area near Mission Bay?

For more details about picking new dates or cancelling your stay near Mission Bay, head over to our customer service page.

What can I see and do near Mission Bay?

Study the collections at Maritime Museum of San Diego, Whaley House Museum, or Junipero Serra Museum. Casa de Machado y Stewart, McCoy Museum House, and Casa de Estudillo are well-known local landmarks worth a visit. You can catch a show at Humphreys Concerts by the Bay, Cygnet Theater Company, and Red Spade Theater.