The Golden Gate Bridge at dusk with city lights in the background.

Find Boutique Hotels in San Rafael, CA from CA $200

  • Change your mind

    Book hotels with free cancellation
  • Treat yourself

    Sign in to save 10% or more on thousands of hotels
  • Be picky

    Search almost a million properties worldwide

Check availability on San Rafael Boutique Hotels

This weekend
Next weekend

Our top choices for San Rafael boutique hotels

Carneros Resort and Spa

Carneros Resort and Spa
5.0 star property
Napa
9.2 out of 10, Wonderful, (376 reviews)
"Wonderful property"
United States
Ahan
The price is CA $910
CA $1,163 total
includes taxes & fees
Jul 6 - Jul 7
Carneros Resort and Spa

MacArthur Place Hotel & Spa

MacArthur Place Hotel & Spa
4.0 star property
Sonoma
9.4 out of 10, Exceptional, (862 reviews)
"Beautiful pkace"
United States
Dawn
The price is CA $573
CA $757 total
includes taxes & fees
Jul 19 - Jul 20
MacArthur Place Hotel & Spa

Hotel Zephyr San Francisco

Hotel Zephyr San Francisco
4.0 star property
Fisherman's Wharf
8.6 out of 10, Excellent, (2,661 reviews)
"Great Hotel."
United States
BALTAZAR NAPOLEON GUERRA
The price is CA $214
CA $311 total
includes taxes & fees
Jul 8 - Jul 9
Hotel Zephyr San Francisco

Berkeley City Club

Berkeley City Club
2.5 star property
Telegraph District
8.8 out of 10, Excellent, (736 reviews)
"We love to stay here! The historic building is beautiful, the staff is very friendly and the breakfast is quite good."
United States
Andy
The price is CA $339
CA $390 total
includes taxes & fees
Jun 28 - Jun 29
Berkeley City Club

Harbor Court Hotel

Harbor Court Hotel
4.0 star property
Downtown San Francisco
9.0 out of 10, Wonderful, (1,000 reviews)
"Location is great. Very cozy lobby and friendly staff."
United States
Cyrus
The price is CA $178
CA $278 total
includes taxes & fees
Jul 10 - Jul 11
Harbor Court Hotel

Argonaut Hotel

Argonaut Hotel
4.5 star property
Fisherman's Wharf
9.4 out of 10, Exceptional, (1,322 reviews)
"Clean rooms, wonderful staff, good drinks."
United States
Lexie
The price is CA $351
CA $475 total
includes taxes & fees
Jul 13 - Jul 14
Argonaut Hotel

The Clancy, Autograph Collection by Marriott

The Clancy, Autograph Collection by Marriott
4.0 star property
Downtown San Francisco
9.2 out of 10, Wonderful, (1,008 reviews)
"Great hotel, walking distance to oracle park. Great breakfast and bar too!"
United States
Jose
The price is CA $234
CA $339 total
includes taxes & fees
Jul 17 - Jul 18
The Clancy, Autograph Collection by Marriott

Inn At Union Square

Inn At Union Square
3.5 star property
Union Square
9.2 out of 10, Wonderful, (1,001 reviews)
"Excellent stay"
United States
MARLON
The price is CA $147
CA $208 total
includes taxes & fees
Jul 5 - Jul 6
Inn At Union Square

The Marker Union Square San Francisco

The Marker Union Square San Francisco
4.0 star property
Union Square
9.2 out of 10, Wonderful, (1,363 reviews)
"Lovely stay, gorgeous space."
United States
Rachel
The price is CA $232
CA $273 total
includes taxes & fees
Jul 6 - Jul 7
The Marker Union Square San Francisco

Hotel Emblem San Francisco

Hotel Emblem San Francisco
4.0 star property
Union Square
9.4 out of 10, Exceptional, (1,005 reviews)
"Stayed here for 2 nights and enjoyed our visit. The room was very clean and comfortable. The staff was helpful and kind and the location was in a very good spot for our needs and seemed safe."
United States
Shannon
The price is CA $171
CA $258 total
includes taxes & fees
Jun 28 - Jun 29
Hotel Emblem San Francisco
Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.

Top San Rafael Hotel Reviews

Frequently asked questions

What's there to see and do in San Rafael?
The shopping, festivals, and restaurants are just some of the things to enjoy while you're in the area. While you're out and about in San Rafael, popular attractions like Oracle Park, Alcatraz Island, and Pier 39 are worth a visit. You might also want to see spots like Chase Center, San Francisco Bay, and Mission San Rafael Arcangel during your trip.
What kind of weather should I plan for when I travel to San Rafael?
Getting an idea of what to expect from the weather in San Rafael will help you enjoy your stay to the fullest. The hottest months are usually September and August with an average temp of 63°F, while the coldest months are January and February with an average of 51°F. Average annual precipitation for San Rafael is 21 inches.
What's the best way to get to my boutique hotel in San Rafael?
You have a few options for getting to San Rafael. The closest major airport is Oakland Intl. Airport (OAK), which is located 25 mi (40.3 km) from the heart of the city. If you'd like to explore around the area, consider renting a car to take in more sights.

Explore a world of travel with Expedia