A white sandy beach with clear turquoise water, a traditional boat, palm trees, and a thatched-roof hut.

CA $150 Cheap Flights from Manila (MNL) to El Nido (ENI)

View CA $150 flight on Sat, Sep 26, 2026Opens in a new window

Popular airlines from Ninoy Aquino Intl. Airport (MNL) to El Nido (ENI)

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Cheap flights from Manila (MNL) to El Nido (ENI)

Prices were available within the past 7 days and start at CA $150 for one-way flights and CA $358 for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

Cebu Pacific
Fri, Oct 16 - Sat, Oct 17
MNL
Manila
ENI
El Nido
CA $358 Roundtrip, found 2 hours ago
CA $358
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Fri, Oct 16 from Manila to El Nido, returning Sat, Oct 17, priced at CA $358 found 2 hours ago
Cebu Pacific
Fri, Oct 16 - Sat, Oct 17
MNL
Manila
ENI
El Nido
CA $366 Roundtrip, found 2 hours ago
CA $366
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Fri, Oct 16 from Manila to El Nido, returning Sat, Oct 17, priced at CA $366 found 2 hours ago
Cebu Pacific
Thu, Sep 10 - Mon, Sep 14
MNL
Manila
ENI
El Nido
CA $374 Roundtrip, found 2 hours ago
CA $374
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Thu, Sep 10 from Manila to El Nido, returning Mon, Sep 14, priced at CA $374 found 2 hours ago
Cebu Pacific
Mon, Aug 31 - Mon, Sep 7
MNL
Manila
ENI
El Nido
CA $375 Roundtrip, found 3 days ago
CA $375
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Mon, Aug 31 from Manila to El Nido, returning Mon, Sep 7, priced at CA $375 found 3 days ago
Cebu Pacific
Mon, Jun 21 - Thu, Jun 24
MNL
Manila
ENI
El Nido
CA $379 Roundtrip, found 2 hours ago
CA $379
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Mon, Jun 21 from Manila to El Nido, returning Thu, Jun 24, priced at CA $379 found 2 hours ago
Cebu Pacific
Mon, Jun 21 - Thu, Jun 24
MNL
Manila
ENI
El Nido
CA $382 Roundtrip, found 3 days ago
CA $382
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Mon, Jun 21 from Manila to El Nido, returning Thu, Jun 24, priced at CA $382 found 3 days ago
Cebu Pacific
Fri, Oct 16 - Sat, Oct 17
MNL
Manila
ENI
El Nido
CA $383 Roundtrip, found 2 hours ago
CA $383
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Fri, Oct 16 from Manila to El Nido, returning Sat, Oct 17, priced at CA $383 found 2 hours ago
Cebu Pacific
Mon, Jun 21 - Thu, Jun 24
MNL
Manila
ENI
El Nido
CA $386 Roundtrip, found 2 hours ago
CA $386
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Mon, Jun 21 from Manila to El Nido, returning Thu, Jun 24, priced at CA $386 found 2 hours ago
Cebu Pacific
Fri, Oct 16 - Sat, Oct 17
MNL
Manila
ENI
El Nido
CA $391 Roundtrip, found 2 hours ago
CA $391
Roundtrip
found 2 hours ago
Select Cebu Pacific flight, departing Fri, Oct 16 from Manila to El Nido, returning Sat, Oct 17, priced at CA $391 found 2 hours ago
Cebu Pacific
Tue, May 4 - Sun, May 9
MNL
Manila
ENI
El Nido
CA $400 Roundtrip, found 3 days ago
CA $400
Roundtrip
found 3 days ago
Select Cebu Pacific flight, departing Tue, May 4 from Manila to El Nido, returning Sun, May 9, priced at CA $400 found 3 days ago

Alternative airports near El Nido

Prices were available within the past 7 days. Prices and availability are subject to change.

Select flight to El Nido ENI. Cheapest and Closest option available. Average driving time to city centre is 8 minutes. Flights from CA $650
ENI
El Nido
CheapestClosest
Average driving time to city centre8 min
Flights from CA $650

Frequently asked questions

How much does a flight from Manila (MNL) to El Nido (ENI) cost?
You can find cheap one-way flights from CA $150 and cheap return flights from CA $358 MNL to ENI with Expedia. One-way flights typically cost between CA$154 and CA$429 and return flights often range between CA$357 and CA$850. Flight prices vary based on the month and day of the week you want to travel, as well as the airline and how far in advance you book your ticket. Filter your search on Expedia by "Price (lowest to highest)" to see the cheapest fares first, and use the Price Tracking tool to receive alerts when MNL to ENI ticket fares go up or down.
What is the cheapest month to fly from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI)?
September is typically the cheapest month to fly from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI), with average return fares around CA$256. September often sees lower prices because it falls outside of peak travel seasons, when demand tends to decrease. Other cheap months to fly from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) include March and August.
Which airlines fly direct from Manila (MNL) to El Nido (ENI)?
Enter MNL to ENI and your travel dates, then apply the 'Nonstop' filter to see only direct flights.
How do I find cheap flights from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI)?
To find a cheap flight from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI), be flexible with your dates. Traveling outside of peak vacation months and booking a mid-week flight can help you save. Early morning and late night flights are often more affordable, too. Expedia allows you to compare flight times, airlines and routes all in one place to find low fares. You can also set up Price Tracking and receive alerts when fares go up or down.
What is the best airline to fly with from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI)?
The best airline to fly with from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) will differ from traveler to traveler. If you like to fly early, 1 Time Airlines offers early morning flights. If price is the most important factor, Cebgo typically offers the lowest fares. Cebu Pacific offers the most daily flights from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI), which is great if flexibility is what you value most. The best carrier for this journey could also be the one you have a loyalty membership with, as flying with that airline or another airline within the same alliance could help you collect points or enjoy lounge access.
What is the best time to fly from Manila (MNL) to El Nido (ENI)?
The best time to fly is usually mid-week (Tuesday or Wednesday) and during early morning hours as flights tend to be cheaper, less crowded, and generally more on-time. Avoid major holidays and peak vacation seasons for smoother travel. Combining off-peak days and hours often gives the best combination of cost, comfort, and convenience.
How many flights per day from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI)?
There are approximately 9 connecting flights per day from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI). Some common connection points include Godofredo P. Ramos (MPH), Mactan - Cebu Intl. (CEB), and Bohol Intl. (TAG).
What is the earliest flight from Manila (MNL) to El Nido (ENI)?
Sort flights by "Departure (earliest)" on Expedia to find the earliest flight from Manila (MNL) to El Nido (ENI). To compare more early flights, use the "Early Morning" and "Morning" filters in your search.
What day of the week has the most flights from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI)?
You'll generally find the most flights from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) on a Tuesday, with around 11 flights available. This gives you a good selection of options for your travel plans. Major airlines on this route include Cebu Pacific, 1 Time Airlines, and Cebgo.
What are the most popular departure times for flights from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI)?
The most popular departure times for flights from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) are in the morning, from 9am to 12pm. Many major carriers, including Cebu Pacific, 1 Time Airlines and Cebgo, offer flights during this window. Many travelers prefer this because it allows for an early start to your journey, getting you to El Nido with plenty of daylight left to enjoy.
How long does it take to fly from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI)?
There are no nonstop flights from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI). If you're looking for a flight with one stop, the typical travel time is around 8 hours 18 minutes. This route covers a distance of approximately 406 kilometres. Keep in mind that actual flight times can vary due to factors like layover duration, routing, and weather conditions.
Can you fly business or first class from Manila (MNL) to El Nido (ENI)?
Select the "Business class" and "First class" filters when looking for Manila (MNL) to El Nido (ENI) flights on Expedia. This is the easiest way to compare prices, routes and flight times for your trip.
How do I earn miles on a Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) flight with Expedia?
It's easy to earn miles on a Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) flight when you book with Expedia. Before you confirm your booking, simply select your frequent flyer program and enter your program number. As a member of One Key™, you can also earn OneKeyCash™* on top of your airline miles when you book with Expedia.*Excludes taxes and fees. OneKeyCash is not redeemable for cash and can only be used on Expedia and other participating brands.
Is it cheaper to buy a plane ticket from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) at the last minute?
Typically, booking a last minute flight from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) will be more expensive than booking in advance. As the departure date approaches, there are usually fewer seats available which can drive up the cost. However, if there's some wiggle room with your travel dates and times, you could bag a cheap last-minute fare.
Is it cheaper to book a Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) flight and hotel package?
Securing a Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) flight and hotel package is usually cheaper than booking separately. With Expedia, you can enjoy the ease of organizing your travels all in one place. Select from our extensive range of stays and then add flights, activities and car rentals to your booking. Bundle everything together, and you could save hundreds of dollars.
Can I cancel or change the date of my flight from Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI)?
If you booked your Manila (MNL-Ninoy Aquino Intl.) to El Nido (ENI) flight within the last 24 hours, you may be able to modify or cancel it without any fees. Depending on the airline and the type of ticket you have, additional charges may apply for changes beyond this timeframe. Airline policies and contact information can be found in your itinerary or confirmation email. Or, head to our Customer Service portal if you'd like more information.

Travel information

Origin airport
Ninoy Aquino Intl.
Destination airport
El Nido
Airlines serving
Cebu Pacific
Roundtrip price
CA $358
Distance
403 km

Book with confidence

Manila to El Nido Flights

The easy way to book your flights from Manila to El Nido 

With Expedia, it’s simple to find and book flights to El Nido from Manila whether you’re traveling for business or pleasure. Enter your travel dates, hit search, and choose your flight from 20 airlines that cover this route. There are nonstop flights to El Nido, too.  

Choose your preferred carrier and cabin class with the advanced search tool and select your ideal departure time. Then, if you want, you can see just nonstop or refundable flights. And if you’re traveling last minute, just enter the date to check out flights from Manila to El Nido today, tomorrow, or this week.  

 

Save dollars with cheap flights from Ninoy Aquino Intl., MNL to El Nido, ENI 

Sort your search results by price to find great deals on your flight from Manila to El Nido—you get all your cheapest options first. Grab yourself a bargain now—the lowest price on flights to El Nido from Manila currently is just CA $358 rising to CA $400.  

Here are more money-saving tips: 

  • Fly in October when flight prices are normally at their lowest 
  • Book about a month to 6 weeks before you travel for the best prices to El Nido  
  • Avoid peak season and weekends when flights can cost more
  • Early morning and late-night flights are sometimes cheaper, so try varying your travel times 
  • One surefire way to save money on your flight is to book your flight and hotel together with Expedia. Sometimes, the savings are so large that the flight is basically free! 

 

Reasons to choose Expedia for your flight to El Nido from Manila 

Whatever your destination, budget, or reason to travel, in just one quick search, you can choose from loads of flights, airlines, and cabin classes. The filters make it quick and easy to find your ideal flights, and if you choose one of the flexible options, you won’t be charged to change your flight. So book your flight to El Nido with Expedia today.

Manila to El Nido Flights

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