A white sandy beach with clear turquoise water, a traditional boat, palm trees, and a thatched-roof hut.

CA $404 Cheap Flights from Tokyo (NRT) to El Nido (ENI)

View CA $404 flight on Fri, Aug 21, 2026Opens in a new window

Popular airlines from Narita Intl. Airport (NRT) to El Nido (ENI)

  • Be in the know

    Get alerts if flight prices drop or rise*

  • Book smarter

    Save up to 30% on select hotels after you book a flight*

  • Earn twice

    Earn your airline miles on top of our rewards
    Sign in

Cheap flights from Tokyo (NRT) to El Nido (ENI)

Prices were available within the past 7 days and start at CA $404 for one-way flights and for round trip, for the period specified. Prices and availability are subject to change. Additional terms apply.

Frequently asked questions

How much does a flight from Tokyo (NRT-Narita Intl.) to El Nido (ENI) cost?
You can find one-way and return flights from NRT to ENI with Expedia. Flight prices vary based on the month and day of the week you want to travel, as well as the airline and how far in advance you book your ticket. Filter your search on Expedia by "Price (lowest to highest)" to see our cheapest fares first, and use the Price Tracking tool to receive alerts when NRT to ENI ticket fares go up or down.
What is the cheapest month to fly from Tokyo (NRT-Narita Intl.) to El Nido (ENI)?
The cheapest months to fly from NRT to ENI are typically during off-peak season when demand is low. Traveling in off-peak or shoulder months is usually a good way to secure cheap tickets, just remember to avoid flying during holidays if you are able to. Use the calendar view in your search to see which months have low fares on this route.
Which airlines fly direct from Tokyo (NRT) to El Nido (ENI)?
Enter NRT to ENI and your travel dates, then apply the 'Nonstop' filter to see only direct flights.
How do I find cheap flights from Tokyo (NRT-Narita Intl.) to El Nido (ENI)?
To find a cheap flight from Tokyo (NRT-Narita Intl.) to El Nido (ENI), be flexible with your dates. Traveling outside of peak vacation months and booking a mid-week flight can help you save. Early morning and late night flights are often more affordable, too. Expedia allows you to compare flight times, airlines and routes all in one place to find low fares. You can also set up Price Tracking and receive alerts when fares go up or down.
What is the best time to fly from Tokyo (NRT-Narita Intl.) to El Nido (ENI)?
The best time to fly is usually mid-week (Tuesday or Wednesday) and during early morning hours as flights tend to be cheaper, less crowded, and generally more on-time. Avoid major holidays and peak vacation seasons for smoother travel. Combining off-peak days and hours often gives the best combination of cost, comfort, and convenience.
How many flights per day from Tokyo (NRT-Narita Intl.) to El Nido (ENI)?
There are approximately 2 connecting flights per day from Tokyo (NRT-Narita Intl.) to El Nido (ENI). Some common connection points include Clark Intl. (CRK) and Mactan - Cebu Intl. (CEB).
What is the earliest flight from Tokyo (NRT) to El Nido (ENI)?
Sort flights by "Departure (earliest)" on Expedia to find the earliest flight from Tokyo (NRT) to El Nido (ENI). To compare more early flights, use the "Early Morning" and "Morning" filters in your search.
What day of the week has the most flights from Tokyo (NRT-Narita Intl.) to El Nido (ENI)?
You'll find the most flights from Tokyo (NRT-Narita Intl.) to El Nido (ENI) on Thursdays, with around 2 flights available. This gives you a good selection for your travel plans. Cebu Pacific is a major airline on this route. Flight schedules are consistent throughout the week, so you'll find similar options on other days too.
What are the most popular departure times for flights from Tokyo (NRT-Narita Intl.) to El Nido (ENI)?
The most popular departure times for flights from Tokyo (NRT-Narita Intl.) to El Nido (ENI) are between 9am and 12pm. Many travelers prefer this time, and Cebu Pacific offers flights during this window.
How long does it take to fly from Tokyo (NRT-Narita Intl.) to El Nido (ENI)?
There are no nonstop flights from Tokyo (NRT-Narita Intl.) to El Nido (ENI). Flights with one stop typically take around 9 hours 50 minutes, covering a distance of approximately 3,452 kilometres. Keep in mind that these are average times, and your actual travel duration can vary depending on the specific routing, layover times, and factors like wind patterns.
Can you fly business or first class from Tokyo (NRT) to El Nido (ENI)?
Select the "Business class" and "First class" filters when looking for Tokyo (NRT) to El Nido (ENI) flights on Expedia. This is the easiest way to compare prices, routes and flight times for your trip.
How do I earn miles on a Tokyo (NRT-Narita Intl.) to El Nido (ENI) flight with Expedia?
It's easy to earn miles on a Tokyo (NRT-Narita Intl.) to El Nido (ENI) flight when you book with Expedia. Before you confirm your booking, simply select your frequent flyer program and enter your program number. As a member of One Key™, you can also earn OneKeyCash™* on top of your airline miles when you book with Expedia.*Excludes taxes and fees. OneKeyCash is not redeemable for cash and can only be used on Expedia and other participating brands.
Is it cheaper to buy a plane ticket from Tokyo (NRT-Narita Intl.) to El Nido (ENI) at the last minute?
Typically, booking a last minute flight from Tokyo (NRT-Narita Intl.) to El Nido (ENI) will be more expensive than booking in advance. As the departure date approaches, there are usually fewer seats available which can drive up the cost. However, if there's some wiggle room with your travel dates and times, you could bag a cheap last-minute fare.
Is it cheaper to book a Tokyo (NRT-Narita Intl.) to El Nido (ENI) flight and hotel package?
Securing a Tokyo (NRT-Narita Intl.) to El Nido (ENI) flight and hotel package is usually cheaper than booking separately. With Expedia, you can enjoy the ease of organizing your travels all in one place. Select from our extensive range of stays and then add flights, activities and car rentals to your booking. Bundle everything together, and you could save hundreds of dollars.
Can I cancel or change the date of my flight from Tokyo (NRT-Narita Intl.) to El Nido (ENI)?
If you booked your Tokyo (NRT-Narita Intl.) to El Nido (ENI) flight within the last 24 hours, you may be able to modify or cancel it without any fees. Depending on the airline and the type of ticket you have, additional charges may apply for changes beyond this timeframe. Airline policies and contact information can be found in your itinerary or confirmation email. Or, head to our Customer Service portal if you'd like more information.

Travel information

Origin airport
Narita Intl.
Destination airport
El Nido
Distance
3432 km

Book with confidence

Narita to El Nido Flights

The easy way to book your flights from Tokyo to El Nido 

With Expedia, it’s simple to find and book flights to El Nido from Tokyo whether you’re traveling for business or pleasure. Enter your travel dates, hit search, and choose your flight from 5 airlines that cover this route. There are nonstop flights to El Nido, too.  

Choose your preferred carrier and cabin class with the advanced search tool and select your ideal departure time. Then, if you want, you can see just nonstop or refundable flights. And if you’re traveling last minute, just enter the date to check out flights from Tokyo to El Nido today, tomorrow, or this week.  

 

Save dollars with cheap flights from Narita Intl., NRT to El Nido, ENI 

Sort your search results by price to find great deals on your flight from Tokyo to El Nido—you get all your cheapest options first. Grab yourself a bargain now—the lowest price on flights to El Nido from Tokyo currently is just rising to .  

Here are more money-saving tips: 

  • Fly in when flight prices are normally at their lowest 
  • Book about a month to 6 weeks before you travel for the best prices to El Nido  
  • Avoid peak season and weekends when flights can cost more
  • Early morning and late-night flights are sometimes cheaper, so try varying your travel times 
  • One surefire way to save money on your flight is to book your flight and hotel together with Expedia. Sometimes, the savings are so large that the flight is basically free! 

 

Reasons to choose Expedia for your flight to El Nido from Tokyo 

Whatever your destination, budget, or reason to travel, in just one quick search, you can choose from loads of flights, airlines, and cabin classes. The filters make it quick and easy to find your ideal flights, and if you choose one of the flexible options, you won’t be charged to change your flight. So book your flight to El Nido with Expedia today.

Narita to El Nido Flights

Explore a world of travel with Expedia

*Available to Expedia members.