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Cheap Hotels in Southeast Minnesota

Quality Inn near Medical Center

5708 Bandel Road NW Rochester MN

12 min drive from Mayo Clinic

Book a stay at this business-friendly hotel in Rochester. Enjoy free breakfast, free parking, and a fitness center. Our guests praise the breakfast and the helpful ...

7.8/10 Good! (915 reviews)

"First off the staff was great l, no complaints there. The hotel when we arrived smelled musty. The room we stayed in had black mold in the shower, by the toilet, and on the ceiling in the restroom. The room smelled musty as well. If you're looking for a cheap hotel and dont mind mentioned above have ..."

Reviewed on Jun 25, 2026

Med City Inn & Suites - Mayo Clinic Area

435 16th Ave Nw Rochester MN

26 min walk from Mayo Clinic

Book a stay at this family-friendly motel in Rochester. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the breakfast and the helpful staff ...

8/10 Very good! (1,003 reviews)

"This is a very reasonable location close enough to everything. It was the quietest location very peaceful. The only downside was the mattress was lumpy. It was a wonderful stay."

Reviewed on Jun 25, 2026

Nichols Inn of Red Wing

1819 Old West Main Street Red Wing MN

2 hours drive from Mayo Clinic

Book a stay at this business-friendly hotel in Red Wing. Enjoy free breakfast, free WiFi, and free parking. Our guests praise the helpful staff and the clean ...

9/10 Wonderful! (1,002 reviews)

"Everything was great!"

Reviewed on Jun 24, 2026

See all 915 properties in Southeast Minnesota

Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply.