Title: Book the Best BOUTIQUE Hotels in San Juan Islands in 2025 | Expedia.ca [San Juan Islands Travel Guide](https://expedia.ca/San-Juan-Islands.dx6023373)[Hotels in San Juan Islands](https://expedia.ca/San-Juan-Islands-Hotels.d6023373.Travel-Guide-Hotels)[Vacation Rentals in San Juan Islands](https://expedia.ca/San-Juan-Islands-Vacation-Rentals.d6023373.Travel-Guide-VacationRentals)[Flights to San Juan Islands](https://expedia.ca/Cheap-Flights-To-San-Juan-Islands.d6023373.Travel-Guide-Flights)[Things to do in San Juan Islands](https://expedia.ca/Things-To-Do-In-San-Juan-Islands.d6023373.Travel-Guide-Activities)[San Juan Islands Car Rentals](https://expedia.ca/Car-Rentals-In-San-Juan-Islands.d6023373.Car-Rental-Guide)[San Juan Islands Vacation Packages](https://expedia.ca/San-Juan-Islands.d6023373.Destination-Travel-Guides) ![Orcas Island which includes mist or fog, mountains and landscape views](https://a.travel-assets.com/findyours-php/viewfinder/images/res70/47000/47915-San-Juan-Islands.jpg?impolicy=fcrop&w=1200&h=500&q=medium) # Find Boutique Hotels in San Juan Islands, WA ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__calendar_shield.svg) ### Change your mind Book hotels with free cancellation ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__deals.svg) ### Treat yourself Sign in to save 10% or more on thousands of hotels [Sign in](https://www.expedia.ca/login) ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__bed.svg) ### Be picky Search almost a million properties worldwide ## Check availability on San Juan Islands Boutique Hotels Tonight [Oct 15 - Oct 16](https://www.expedia.ca/Hotel-Search?regionId=6023373&startDate=2025-10-15&endDate=2025-10-16&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Tomorrow [Oct 16 - Oct 17](https://www.expedia.ca/Hotel-Search?regionId=6023373&startDate=2025-10-16&endDate=2025-10-17&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) This weekend [Oct 17 - Oct 19](https://www.expedia.ca/Hotel-Search?regionId=6023373&startDate=2025-10-17&endDate=2025-10-19&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Next weekend [Oct 24 - Oct 26](https://www.expedia.ca/Hotel-Search?regionId=6023373&startDate=2025-10-24&endDate=2025-10-26&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) ## Top San Juan Islands Boutique Hotels We don't have any properties that match your exact search [See all properties in San Juan Islands](https://expedia.ca/Hotel-Search?startDate=2025-10-29&endDate=2025-10-30®ionId=6023373&adults=2) ## Recommended hotels in San Juan Islands ![Comfort Suite, 1 King Bed, Balcony, Ocean View](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/3611a787.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/7dfde5d5.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![McMillin Suite - Top Floor | Living area](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/e4536c7f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property - evening/night](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/097f3722.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Roche Harbor Resort Friday Harbor 9.2/10 Wonderful (403) "Interesting historic and Beautiful place" CA $273 CA $316 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Roche-Harbor-Resort.h16604230.Hotel-Information) ![Room, 1 Queen Bed (View) | Balcony view](https://images.trvl-media.com/lodging/16000000/15100000/15099200/15099117/442e7e8a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Garden](https://images.trvl-media.com/lodging/16000000/15100000/15099200/15099117/d806c55a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Egyptian cotton sheets, premium bedding, laptop workspace](https://images.trvl-media.com/lodging/16000000/15100000/15099200/15099117/2b080aca.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Luxury Studio Suite, 1 King Bed, Balcony, Ocean View | Front of property](https://images.trvl-media.com/lodging/16000000/15100000/15099200/15099117/93c1981b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Outlook Inn Eastsound 9.2/10 Wonderful (500) "Gorgeous views, relaxing, dog-friendly - everything we were looking for." CA $339 CA $395 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Eastsound-Hotels-Outlook-Inn-On-Orcas-Island.h15099117.Hotel-Information) ![Outdoor spa tub](https://images.trvl-media.com/lodging/46000000/45480000/45474100/45474041/8ef09b0f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Property grounds](https://images.trvl-media.com/lodging/46000000/45480000/45474100/45474041/26c47b11.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Superior Room](https://images.trvl-media.com/lodging/46000000/45480000/45474100/45474041/35ce0c3f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property - evening/night](https://images.trvl-media.com/lodging/46000000/45480000/45474100/45474041/15025230.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Otters Pond Bed & Breakfast Eastsound 10/10 Exceptional (60) "Excellent stay, felt like staying at a friends who made the best breakfast I’ve ever had! " CA $221 CA $244 total includes taxes & fees Nov 14 - Nov 15 [](https://www.expedia.ca/Eastsound-Hotels-Otters-Pond-Bed-Breakfast.h45474041.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/6ed42192.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Fridge, microwave](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/2162b1ea.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Dining room](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/e9d15850.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/e1efc6ab.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Trumpeter Inn Friday Harbor 10/10 Exceptional (242) "Amazing stay. Would highly recommend." CA $221 CA $243 total includes taxes & fees Oct 29 - Oct 30 [](https://www.expedia.ca/Friday-Harbor-Hotels-Trumpeter-Inn.h34909004.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/5b4be07d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/20132543.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Flat-screen TV, fireplace](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/f063d289.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Full-size fridge, oven, stovetop, coffee/tea maker](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/280d82e3.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Snug Harbor Resort Friday Harbor 9.8/10 Exceptional (417) "What a special place to relax and enjoy!" CA $289 CA $319 total includes taxes & fees Nov 15 - Nov 16 [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort.h34844071.Hotel-Information) ![Traditional Cabin, 1 Bedroom, Non Smoking, Beach View (No Pets) | Beach/ocean view](https://images.trvl-media.com/lodging/33000000/32460000/32452300/32452272/fb059030.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Traditional Cabin, 1 Bedroom, Non Smoking, Beach View (No Pets) | Living area](https://images.trvl-media.com/lodging/33000000/32460000/32452300/32452272/6158aecc.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Family Cabin, 2 Bedrooms, Non Smoking, Beach View | Terrace/patio](https://images.trvl-media.com/lodging/33000000/32460000/32452300/32452272/cfc3b72c.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Signature Cabin, 2 Bedrooms, Non Smoking, Beach View | Terrace/patio](https://images.trvl-media.com/lodging/33000000/32460000/32452300/32452272/cba890fe.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### West Beach Resort Eastsound 9.4/10 Exceptional (103) "Beautiful cabins and amazing views!" CA $254 CA $281 total includes taxes & fees Nov 3 - Nov 4 [](https://www.expedia.ca/Eastsound-Hotels-West-Beach-Resort.h32452272.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/1fbe96f1.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Outdoor spa tub](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/7166daf1.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/4322486e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Laptop workspace, iron/ironing board, free WiFi, bed sheets](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/4560c473.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Friday Harbor Suites Friday Harbor 8.4/10 Very good (1018) "Great place to stay. " CA $258 CA $286 total includes taxes & fees Oct 21 - Oct 22 [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-Suites.h1189744.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/52000000/51750000/51741500/51741445/1f1838dd.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Dining](https://images.trvl-media.com/lodging/52000000/51750000/51741500/51741445/eb41c17f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Outdoor wedding area](https://images.trvl-media.com/lodging/52000000/51750000/51741500/51741445/2ea4c127.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Water view](https://images.trvl-media.com/lodging/52000000/51750000/51741500/51741445/a09c5412.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Lopez Islander Resort Lopez Island 8.6/10 Excellent (350) "Big spacious rooms in a quiet remote setting with beautiful views." CA $223 CA $246 total includes taxes & fees Oct 16 - Oct 17 [](https://www.expedia.ca/Lopez-Island-Hotels-Lopez-Islander-Resort.h51741445.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/36000000/35120000/35113500/35113476/e43da03c.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Water View Condo | Private kitchen](https://images.trvl-media.com/lodging/36000000/35120000/35113500/35113476/a6322e9c.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Side View Condo | Private kitchen](https://images.trvl-media.com/lodging/36000000/35120000/35113500/35113476/ddb477bd.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Water View Condo | In-room dining](https://images.trvl-media.com/lodging/36000000/35120000/35113500/35113476/1b4ffdcd.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Landmark Inn on Orcas Island Eastsound 9.4/10 Exceptional (179) "Excellent condo with a great view and everything needed for a great vacation." CA $252 CA $278 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Eastsound-Hotels-Landmark-Inn-On-Orcas-Island.h35113476.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/d74d1a58.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Reception](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/9acfff4b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Double Room, 2 Queen Beds](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/ee11a630.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Reception](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/c1bf16ea.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### The Orca Inn Friday Harbor 7.8/10 Good (1012) "Great stay" CA $155 CA $172 total includes taxes & fees Oct 16 - Oct 17 [](https://www.expedia.ca/Friday-Harbor-Hotels-The-Orca-Inn.h5784280.Hotel-Information) Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply. [View all properties](https://expedia.ca/Hotel-Search?startDate=2025-10-29&endDate=2025-10-30®ionId=6023373&adults=2&specialized_stays_group_explore=boutique_property&sort=RECOMMENDED&openPlayBack=true) ## Top San Juan Islands Hotel Reviews ![Bird Rock Hotel](//images.trvl-media.com/lodging/1000000/920000/913700/913611/2aa3eb52_y.jpg) ### Bird Rock Hotel 10/10 Excellent "Never really saw the staff, but didn't need them. 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