Title: Book the Best BOUTIQUE Hotels in San Juan Island in 2025 | Expedia.ca [San Juan Island Travel Guide](https://expedia.ca/San-Juan-Island.dx6054490)[Hotels in San Juan Island](https://expedia.ca/San-Juan-Island-Hotels.d6054490.Travel-Guide-Hotels)[Vacation Rentals in San Juan Island](https://expedia.ca/San-Juan-Island-Vacation-Rentals.d6054490.Travel-Guide-VacationRentals)[Flights to San Juan Island](https://expedia.ca/Cheap-Flights-To-San-Juan-Island.d6054490.Travel-Guide-Flights)[Things to do in San Juan Island](https://expedia.ca/Things-To-Do-In-San-Juan-Island.d6054490.Travel-Guide-Activities)[San Juan Island Car Rentals](https://expedia.ca/Car-Rentals-In-San-Juan-Island.d6054490.Car-Rental-Guide)[San Juan Island Vacation Packages](https://expedia.ca/San-Juan-Island.d6054490.Destination-Travel-Guides) ![San Juan Island which includes island views and boating](https://a.travel-assets.com/findyours-php/viewfinder/images/res70/47000/47801-Friday-Harbor.jpg?impolicy=fcrop&w=1200&h=500&q=medium) # Find Boutique Hotels in San Juan Island, WA ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__calendar_shield.svg) ### Change your mind Book hotels with free cancellation ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__deals.svg) ### Treat yourself Sign in to save 10% or more on thousands of hotels [Sign in](https://www.expedia.ca/login) ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__bed.svg) ### Be picky Search almost a million properties worldwide ## Check availability on San Juan Island Boutique Hotels Tonight [Oct 12 - Oct 13](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-12&endDate=2025-10-13&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Tomorrow [Oct 13 - Oct 14](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-13&endDate=2025-10-14&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Next weekend [Oct 17 - Oct 19](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-17&endDate=2025-10-19&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) In two weeks [Oct 24 - Oct 26](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-24&endDate=2025-10-26&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) ## Top San Juan Island Boutique Hotels We don't have any properties that match your exact search [See all properties in San Juan Island](https://expedia.ca/Hotel-Search?startDate=2025-10-26&endDate=2025-10-27®ionId=6054490&adults=2) ## Recommended hotels in San Juan Island ![Exterior](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/6ed42192.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Fridge, microwave](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/2162b1ea.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Dining room](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/e9d15850.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Fridge, microwave](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/ebde25e7.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Trumpeter Inn Friday Harbor 10/10 Exceptional (241) "Amazing stay. Would highly recommend." CA $201 CA $222 total includes taxes & fees Oct 13 - Oct 14 [](https://www.expedia.ca/Friday-Harbor-Hotels-Trumpeter-Inn.h34909004.Hotel-Information) ![Comfort Suite, 1 King Bed, Balcony, Ocean View](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/3611a787.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property - evening/night](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/097f3722.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![McMillin Suite - Top Floor | Living area](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/e4536c7f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/7dfde5d5.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Roche Harbor Resort Friday Harbor 9.2/10 Wonderful (400) "Interesting historic and Beautiful place" [](https://www.expedia.ca/Friday-Harbor-Hotels-Roche-Harbor-Resort.h16604230.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/4322486e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/b805211e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Cafe](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/ce853ab0.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/98210912.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Friday Harbor Suites Friday Harbor 8.4/10 Very good (1015) "Great place to stay. " CA $248 CA $275 total includes taxes & fees Oct 19 - Oct 20 [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-Suites.h1189744.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/5b4be07d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Flat-screen TV, fireplace](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/f063d289.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Premium bedding, down comforters, pillowtop beds, blackout drapes](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/2e25c97a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Full-size fridge, oven, stovetop, coffee/tea maker](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/280d82e3.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Snug Harbor Resort Friday Harbor 9.8/10 Exceptional (414) "Loved our stay here!" CA $289 CA $319 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort.h34844071.Hotel-Information) ![Property grounds](https://images.trvl-media.com/lodging/1000000/920000/913700/913611/2aa3eb52.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Point of interest](https://images.trvl-media.com/lodging/1000000/920000/913700/913611/9f8458ca.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Courtyard](https://images.trvl-media.com/lodging/1000000/920000/913700/913611/5624e8d6.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Single Room](https://images.trvl-media.com/lodging/1000000/920000/913700/913611/34bbd966.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Bird Rock Hotel Friday Harbor 8.8/10 Excellent (360) "Having stayed at Bird Rock and Earthbox I'd choose Earthbox for my next visit to Friday Harbor. Both properties are well decorated and maintained but, despite Bird Rock's convenience, for those who are walking from the ferry, Earthbox has the advantage of being a quiet location who's rooms ( or at least my room ) have sleeping areas that are not flooded with light ( during typical sleeping hours). The staff are very helpful and welcoming." CA $215 CA $238 total includes taxes & fees Oct 13 - Oct 14 [](https://www.expedia.ca/Friday-Harbor-Hotels-Bird-Rock-Hotel.h913611.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/d74d1a58.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Terrace/patio](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/b540d356.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Reception](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/c1bf16ea.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Reception](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/9acfff4b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### The Orca Inn Friday Harbor 7.8/10 Good (1010) "Great stay" CA $135 CA $150 total includes taxes & fees Oct 13 - Oct 14 [](https://www.expedia.ca/Friday-Harbor-Hotels-The-Orca-Inn.h5784280.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/26c8fc5e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Cottage, 1 Queen Bed | Terrace/patio](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/c27a6fa7.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Outdoor wedding area](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/0ef81a20.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Signature Suite, 3 Bedrooms, 2 Bathrooms, Ground Floor | In-room dining](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/0ef86081.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Tucker House Inn Friday Harbor 9.4/10 Exceptional (273) "Beautiful and quiet destination." CA $249 CA $275 total includes taxes & fees Oct 26 - Oct 27 [](https://www.expedia.ca/Friday-Harbor-Hotels-Tucker-House-Inn.h1791327.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1060000/1050900/1050864/57b4454b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Point of interest](https://images.trvl-media.com/lodging/2000000/1060000/1050900/1050864/b20d9a2a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Point of interest](https://images.trvl-media.com/lodging/2000000/1060000/1050900/1050864/d57c0554.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Point of interest](https://images.trvl-media.com/lodging/2000000/1060000/1050900/1050864/14b8b6b8.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Earthbox Inn & Spa Friday Harbor 8.8/10 Excellent (991) "The location is excellent, and the check-in and check-out process was very easy." CA $301 CA $333 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Earthbox-Inn-Spa.h1050864.Hotel-Information) ![Hypo-allergenic bedding, down comforters, in-room safe, desk](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/739bad7d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/60295600.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/95bb7737.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![View from property](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/f85fc2e7.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Friday Harbor House Friday Harbor 9.6/10 Exceptional (228) "Perfect little nest" CA $297 CA $329 total includes taxes & fees Nov 9 - Nov 10 [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-House.h10488823.Hotel-Information) ![TV, fireplace, DVD player, video library](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054573/19f36d68.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054573/919aec4b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![TV, fireplace, DVD player, video library](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054573/09b57ccf.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![1 bedroom, WiFi, bed sheets](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054573/dabe08ba.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Snug Harbor Resort and Marina - One Bedroom Waterfront Suite Friday Harbor 10/10 Exceptional (3) "We had a great one-night stay at the resort. The coffee in the shop is delicious!" CA $349 CA $433 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort-And-Marina-One-Bedroom-Waterfront-Suite.h59054573.Hotel-Information) Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply. [View all properties](https://expedia.ca/Hotel-Search?startDate=2025-10-26&endDate=2025-10-27®ionId=6054490&adults=2&specialized_stays_group_explore=boutique_property&sort=RECOMMENDED&openPlayBack=true) ## Top San Juan Island Hotel Reviews ![Bird Rock Hotel](//images.trvl-media.com/lodging/1000000/920000/913700/913611/2aa3eb52_y.jpg) ### Bird Rock Hotel 10/10 Excellent "Never really saw the staff, but didn't need them. 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