Title: Book the Best GREEN Hotels in San Juan Island in 2025 | Expedia.ca [San Juan Island Travel Guide](https://expedia.ca/San-Juan-Island.dx6054490)[Hotels in San Juan Island](https://expedia.ca/San-Juan-Island-Hotels.d6054490.Travel-Guide-Hotels)[Vacation Rentals in San Juan Island](https://expedia.ca/San-Juan-Island-Vacation-Rentals.d6054490.Travel-Guide-VacationRentals)[Flights to San Juan Island](https://expedia.ca/Cheap-Flights-To-San-Juan-Island.d6054490.Travel-Guide-Flights)[Things to do in San Juan Island](https://expedia.ca/Things-To-Do-In-San-Juan-Island.d6054490.Travel-Guide-Activities)[San Juan Island Car Rentals](https://expedia.ca/Car-Rentals-In-San-Juan-Island.d6054490.Car-Rental-Guide)[San Juan Island Vacation Packages](https://expedia.ca/San-Juan-Island.d6054490.Destination-Travel-Guides) ![San Juan Island which includes island views and boating](https://a.travel-assets.com/findyours-php/viewfinder/images/res70/47000/47801-Friday-Harbor.jpg?impolicy=fcrop&w=1200&h=500&q=medium) # Find Green Hotels in San Juan Island, WA ![calendar shield illustration](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__calendar_shield.svg) ### Change your mind Book hotels with free cancellation ![deals illustration](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__deals.svg) ### Treat yourself Sign in to save 10% or more on thousands of hotels [Sign in](https://www.expedia.ca/login) ![bed illustration](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__bed.svg) ### Be picky Search almost a million properties worldwide ## Check availability on San Juan Island Green Hotels Tonight [Oct 2 - Oct 3](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-02&endDate=2025-10-03&adults=2&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Tomorrow [Oct 3 - Oct 4](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-03&endDate=2025-10-04&adults=2&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) This weekend [Oct 3 - Oct 5](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-03&endDate=2025-10-05&adults=2&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Next weekend [Oct 10 - Oct 12](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-10&endDate=2025-10-12&adults=2&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) ## Top San Juan Island Green Hotels We don't have any properties that match your exact search [See all properties in San Juan Island](https://expedia.ca/Hotel-Search?startDate=2025-10-16&endDate=2025-10-17®ionId=6054490&adults=2) ## Recommended hotels in San Juan Island ![Exterior](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/c6e1743f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Standard Room, 1 King Bed, Fireplace](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/78608a93.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Bar (on property)](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/2ed1f570.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Suite | Living area](https://images.trvl-media.com/lodging/2000000/1320000/1311600/1311525/9be408ea.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Anacortes Ship Harbor Inn Anacortes 9.0/10 Wonderful (1003) "Beautiful views and a great place to stay!" CA $124 CA $138 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Mount-Vernon-Hotels-Anacortes-Ship-Harbor-Inn.h1311525.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/6ed42192.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/e1efc6ab.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Dining room](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/e9d15850.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Fridge, microwave](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/2162b1ea.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Trumpeter Inn Friday Harbor 9.8/10 Exceptional (240) "Amazing stay. Would highly recommend." CA $200 CA $221 total includes taxes & fees Oct 5 - Oct 6 [](https://www.expedia.ca/Friday-Harbor-Hotels-Trumpeter-Inn.h34909004.Hotel-Information) ![Standard Room, 2 Queen Beds](https://images.trvl-media.com/lodging/14000000/13140000/13137200/13137122/e3c0d7e6.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/14000000/13140000/13137200/13137122/45229b5b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Standard Room, 2 Queen Beds](https://images.trvl-media.com/lodging/14000000/13140000/13137200/13137122/fea7a302.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/14000000/13140000/13137200/13137122/a6aaee68.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### The Marina Inn Anacortes 9.6/10 Exceptional (1004) "Nice clean place, comfortable bed, nice breakfast and great service." CA $146 CA $165 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Mount-Vernon-Hotels-The-Marina-Inn.h13137122.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/bb3f2332.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/e2eb8df2.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Cabin, Kitchenette](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/bba623b5.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Staircase](https://images.trvl-media.com/lodging/2000000/1670000/1668500/1668426/1e1b4076.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Auld Holland Inn Oak Harbor 8.2/10 Very good (1001) "Really enjoy this property and the cute little cabins. " CA $136 CA $151 total includes taxes & fees Oct 5 - Oct 6 [](https://www.expedia.ca/Oak-Harbor-Hotels-Auld-Holland-Inn.h1668426.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/5b4be07d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/20132543.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Full-size fridge, oven, stovetop, coffee/tea maker](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/280d82e3.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Flat-screen TV, fireplace](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/f063d289.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Snug Harbor Resort Friday Harbor 9.8/10 Exceptional (409) "Loved our stay here!" CA $287 CA $317 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort.h34844071.Hotel-Information) ![Comfort Suite, 1 King Bed, Balcony, Ocean View](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/3611a787.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Village Home - 4br - Evergreen | Private kitchen](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/0131e657.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![McMillin Suite - Top Floor | Living area](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/e4536c7f.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/7dfde5d5.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Roche Harbor Resort Friday Harbor 9.2/10 Wonderful (400) "Interesting historic and Beautiful place" CA $271 CA $314 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Roche-Harbor-Resort.h16604230.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/4322486e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Cafe](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/ce853ab0.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Courtyard](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/a1fca5a6.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/b805211e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Friday Harbor Suites Friday Harbor 8.4/10 Very good (1003) "Great place to stay. " CA $271 CA $300 total includes taxes & fees Nov 1 - Nov 2 [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-Suites.h1189744.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/26c8fc5e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Cottage, 1 Queen Bed | Terrace/patio](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/c27a6fa7.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Signature Suite, 3 Bedrooms, 2 Bathrooms, Ground Floor | In-room dining](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/0ef86081.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Outdoor wedding area](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/0ef81a20.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Tucker House Inn Friday Harbor 9.4/10 Exceptional (271) "Beautiful and quiet destination." CA $238 CA $264 total includes taxes & fees Oct 13 - Oct 14 [](https://www.expedia.ca/Friday-Harbor-Hotels-Tucker-House-Inn.h1791327.Hotel-Information) ![Hypo-allergenic bedding, down comforters, in-room safe, desk](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/739bad7d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![View from property](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/f85fc2e7.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Bar (on property)](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/e5502a9a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/95bb7737.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Friday Harbor House Friday Harbor 9.6/10 Exceptional (228) "Perfect little nest" CA $325 CA $359 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-House.h10488823.Hotel-Information) ![Exterior](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/d74d1a58.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Reception](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/9acfff4b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Reception](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/c1bf16ea.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Double Room, 2 Queen Beds](https://images.trvl-media.com/lodging/6000000/5790000/5784300/5784280/ee11a630.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### The Orca Inn Friday Harbor 7.8/10 Good (1001) "Great stay" CA $127 CA $141 total includes taxes & fees Oct 5 - Oct 6 [](https://www.expedia.ca/Friday-Harbor-Hotels-The-Orca-Inn.h5784280.Hotel-Information) Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply. [View all properties](https://expedia.ca/Hotel-Search?startDate=2025-10-16&endDate=2025-10-17®ionId=6054490&adults=2&specialized_stays_group_explore=green_sustainable&sort=RECOMMENDED&openPlayBack=true) ## Top San Juan Island Hotel Reviews ## Explore a world of travel with Expedia - Lodging - More ways to book - [Hotels & Resorts for Couples in Bellevue](https://www.expedia.ca/Bellevue-Hotels-Couples-Resorts-Hotels.0-0-d6434-tCouplesResortsHotels.Travel-Guide-Filter-Hotels) - [Hotels with Early Check-in in Bellevue](https://www.expedia.ca/Bellevue-Hotels-Hotel-With-Early-Check-In.0-0-d6434-thotelwithearlycheckin.Travel-Guide-Filter-Hotels) - [Winery Hotels in Bellevue](https://www.expedia.ca/Bellevue-Hotels-Winery-Hotel.0-0-d6434-tWineryHotel.Travel-Guide-Filter-Hotels) - [Adults Only Resorts & in Bellingham City Center](https://www.expedia.ca/Bellingham-City-Center-Bellingham-Hotels-Adults-Only-Resorts.0-n553248635976396545-0-tAdultsOnlyResorts.Travel-Guide-Filter-Hotels) - [All Inclusive Resorts and in Bellingham City Center](https://www.expedia.ca/Bellingham-City-Center-Bellingham-Hotels-All-Inclusive-Hotel.0-n553248635976396545-0-tAllInclusiveHotel.Travel-Guide-Filter-Hotels) - 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