Title: Book the Best BOUTIQUE Hotels in San Juan Island in 2025 | Expedia.ca [San Juan Island Travel Guide](https://expedia.ca/San-Juan-Island.dx6054490)[Hotels in San Juan Island](https://expedia.ca/San-Juan-Island-Hotels.d6054490.Travel-Guide-Hotels)[Vacation Rentals in San Juan Island](https://expedia.ca/San-Juan-Island-Vacation-Rentals.d6054490.Travel-Guide-VacationRentals)[Flights to San Juan Island](https://expedia.ca/Cheap-Flights-To-San-Juan-Island.d6054490.Travel-Guide-Flights)[Things to do in San Juan Island](https://expedia.ca/Things-To-Do-In-San-Juan-Island.d6054490.Travel-Guide-Activities)[San Juan Island Car Rentals](https://expedia.ca/Car-Rentals-In-San-Juan-Island.d6054490.Car-Rental-Guide)[San Juan Island Vacation Packages](https://expedia.ca/San-Juan-Island.d6054490.Destination-Travel-Guides) ![San Juan Island which includes island views and boating](https://a.travel-assets.com/findyours-php/viewfinder/images/res70/47000/47801-Friday-Harbor.jpg?impolicy=fcrop&w=1200&h=500&q=medium) # Find Boutique Hotels in San Juan Island, WA ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__calendar_shield.svg) ### Change your mind Book hotels with free cancellation ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__deals.svg) ### Treat yourself Sign in to save 10% or more on thousands of hotels [Sign in](https://www.expedia.ca/login) ![](https://a.travel-assets.com/travel-assets-manager/pictogram-bex/light__bed.svg) ### Be picky Search almost a million properties worldwide ## Check availability on San Juan Island Boutique Hotels Tonight [Oct 28 - Oct 29](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-28&endDate=2025-10-29&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Tomorrow [Oct 29 - Oct 30](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-29&endDate=2025-10-30&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) This weekend [Oct 31 - Nov 2](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-10-31&endDate=2025-11-02&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) Next weekend [Nov 7 - Nov 9](https://www.expedia.ca/Hotel-Search?regionId=6054490&startDate=2025-11-07&endDate=2025-11-09&adults=2&propertyStyle=BOUTIQUE&rfrr=TG.LP.CheckPrices.Hotel&openPlayBack=true) ## Top San Juan Island Boutique Hotels We don't have any properties that match your exact search [See all properties in San Juan Island](https://expedia.ca/Hotel-Search?startDate=2025-11-11&endDate=2025-11-12®ionId=6054490&adults=2) ## Recommended hotels in San Juan Island ![Exterior](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/6ed42192.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Dining room](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/e9d15850.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Fridge, microwave](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/2162b1ea.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Fridge, microwave](https://images.trvl-media.com/lodging/35000000/34910000/34909100/34909004/ebde25e7.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Trumpeter Inn Friday Harbor 10/10 Exceptional (244) "Amazing stay. Would highly recommend." ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Joy CA $220 CA $242 total includes taxes & fees Oct 29 - Oct 30 [](https://www.expedia.ca/Friday-Harbor-Hotels-Trumpeter-Inn.h34909004.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/4322486e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Lobby](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/b805211e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Cafe](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/ce853ab0.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Courtyard](https://images.trvl-media.com/lodging/2000000/1190000/1189800/1189744/a1fca5a6.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Friday Harbor Suites Friday Harbor 8.4/10 Very good (1000) "Great place to stay. " ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Matt CA $244 CA $271 total includes taxes & fees Nov 6 - Nov 7 [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-Suites.h1189744.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/5b4be07d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Full-size fridge, oven, stovetop, coffee/tea maker](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/280d82e3.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/20132543.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Flat-screen TV, fireplace](https://images.trvl-media.com/lodging/35000000/34850000/34844100/34844071/f063d289.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Snug Harbor Resort Friday Harbor 9.8/10 Exceptional (420) "Perfect and romantic place!!!" ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Sorangel CA $282 CA $312 total includes taxes & fees Nov 3 - Nov 4 [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort.h34844071.Hotel-Information) ![Comfort Suite, 1 King Bed, Balcony, Ocean View](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/3611a787.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Village Home - 4br - Evergreen | Private kitchen](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/0131e657.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/7dfde5d5.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Front of property - evening/night](https://images.trvl-media.com/lodging/17000000/16610000/16604300/16604230/097f3722.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Roche Harbor Resort Friday Harbor 9.2/10 Wonderful (408) "Fantastic stay!" ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Seaby CA $272 CA $315 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Roche-Harbor-Resort.h16604230.Hotel-Information) ![Property grounds](https://images.trvl-media.com/lodging/1000000/920000/913700/913611/2aa3eb52.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Property grounds](https://images.trvl-media.com/lodging/1000000/920000/913700/913611/f2fc8111.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Courtyard](https://images.trvl-media.com/lodging/1000000/920000/913700/913611/5624e8d6.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Point of interest](https://images.trvl-media.com/lodging/1000000/920000/913700/913611/9f8458ca.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Bird Rock Hotel Friday Harbor 8.8/10 Excellent (362) "Having stayed at Bird Rock and Earthbox I'd choose Earthbox for my next visit to Friday Harbor. Both properties are well decorated and maintained but, despite Bird Rock's convenience, for those who are walking from the ferry, Earthbox has the advantage of being a quiet location who's rooms ( or at least my room ) have sleeping areas that are not flooded with light ( during typical sleeping hours). The staff are very helpful and welcoming." ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Tara CA $215 CA $238 total includes taxes & fees Oct 29 - Oct 30 [](https://www.expedia.ca/Friday-Harbor-Hotels-Bird-Rock-Hotel.h913611.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/26c8fc5e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Signature Suite, 3 Bedrooms, 2 Bathrooms, Ground Floor | In-room dining](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/0ef86081.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Garden](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/974cee34.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Outdoor wedding area](https://images.trvl-media.com/lodging/2000000/1800000/1791400/1791327/0ef81a20.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Tucker House Inn Friday Harbor 9.4/10 Exceptional (274) "Beautiful and quiet destination." ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Curtis CA $253 CA $280 total includes taxes & fees Oct 29 - Oct 30 [](https://www.expedia.ca/Friday-Harbor-Hotels-Tucker-House-Inn.h1791327.Hotel-Information) ![Hypo-allergenic bedding, down comforters, in-room safe, desk](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/739bad7d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Bar (on property)](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/e5502a9a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/95bb7737.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/11000000/10490000/10488900/10488823/60295600.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Friday Harbor House Friday Harbor 9.6/10 Exceptional (230) "All the staff was very kind and friendly. Very helpful with info and directions. All food was wonderful. I will surely stay again when on island." ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Chester CA $306 CA $339 total includes taxes & fees Nov 5 - Nov 6 [](https://www.expedia.ca/Friday-Harbor-Hotels-Friday-Harbor-House.h10488823.Hotel-Information) ![Front of property](https://images.trvl-media.com/lodging/2000000/1060000/1050900/1050864/57b4454b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Point of interest](https://images.trvl-media.com/lodging/2000000/1060000/1050900/1050864/14b8b6b8.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Point of interest](https://images.trvl-media.com/lodging/2000000/1060000/1050900/1050864/b20d9a2a.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Point of interest](https://images.trvl-media.com/lodging/2000000/1060000/1050900/1050864/8b9ca74e.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Earthbox Inn & Spa Friday Harbor 8.8/10 Excellent (994) "Close to restaurants and stores. Small room but comfortable. Would stay at again!" ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Emily CA $301 CA $333 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Earthbox-Inn-Spa.h1050864.Hotel-Information) ![TV, fireplace, DVD player, video library](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054573/19f36d68.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![TV, fireplace, DVD player, video library](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054573/09b57ccf.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![1 bedroom, WiFi, bed sheets](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054573/dabe08ba.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Exterior](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054573/919aec4b.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Snug Harbor Resort and Marina - One Bedroom Waterfront Suite Friday Harbor 10/10 Exceptional (3) "We had a great one-night stay at the resort. The coffee in the shop is delicious!" ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Zaida R. CA $348 CA $433 total includes taxes & fees Nov 2 - Nov 3 [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort-And-Marina-One-Bedroom-Waterfront-Suite.h59054573.Hotel-Information) ![Fridge, microwave, oven, stovetop](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054552/bc4a2fbc.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![TV, fireplace, DVD player, video library](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054552/89562044.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![Property grounds](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054552/a15a578c.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ![TV, fireplace, DVD player, video library](https://images.trvl-media.com/lodging/60000000/59060000/59054600/59054552/a3123f7d.jpg?impolicy=fcrop&w=357&h=201&p=1&q=medium) ### Snug Harbor Resort and Marina - One Bedroom Waterfront Cabin Friday Harbor 9.6/10 Exceptional (8) "We booked last minute and are so lucky there was an opening! This is such a serene spot and the staff goes out of their way to make your stay the best it can be. We rented the e-bikes and toured the island. Highly recommend!Thank you everyone!" ![United States](https://a.travel-assets.com/egds/marks/flags/us.svg) Sarah W. CA $320 CA $400 total includes taxes & fees Nov 3 - Nov 4 [](https://www.expedia.ca/Friday-Harbor-Hotels-Snug-Harbor-Resort-And-Marina-One-Bedroom-Waterfront-Cabin.h59054552.Hotel-Information) Lowest nightly price found within the past 24 hours based on a 1 night stay for 2 adults. Prices and availability subject to change. Additional terms may apply. [View all properties](https://expedia.ca/Hotel-Search?startDate=2025-11-11&endDate=2025-11-12®ionId=6054490&adults=2&specialized_stays_group_explore=boutique_property&sort=RECOMMENDED&openPlayBack=true) ## Top San Juan Island Hotel Reviews ![Bird Rock Hotel](//images.trvl-media.com/lodging/1000000/920000/913700/913611/2aa3eb52_y.jpg) ### Bird Rock Hotel 10/10 Excellent "Beautiful. If you need extra items the lobby has it for you. They have their own products which are great!!!" 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